miRNEST 2.0, an integrative microRNA resource :: BLAST
>42528_sbi-MIR168:mirbase
Length = 106
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 69
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||||||||||
Sbjct: 70 ccgccttgcaccaagtgaatccgagccg 97
>42741_zma-MIR168a:mirbase
Length = 104
Score = 105 bits (53), Expect = 5e-24
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 60
||||||||||||||||||||||||||||||||| |||||| | | |||||||| ||||
Sbjct: 10 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatc 67
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 68 ccgccttgcaccaagtgaatcggagccg 95
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 105 bits (53), Expect = 5e-24
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 60
||||||||||||||||||||||||||||||||| |||||| | | |||||||| ||||
Sbjct: 7 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatc 64
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 65 ccgccttgcaccaagtgaatcggagccg 92
>42459_sof-MIR168a:mirbase
Length = 104
Score = 105 bits (53), Expect = 5e-24
Identities = 80/88 (90%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 60
||||||||||||||||||||||||||||||||| |||||| | | |||||||| ||||
Sbjct: 10 ccgcctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatc 67
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 68 ccgccttgcaccaagtgaatcggagccg 95
>41888_hvu-MIR168:mirbase
Length = 106
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 60
||||||||||||||||||||||||||||||||| ||||| || | |||||| | ||||
Sbjct: 12 ccgcctcgggctcgcttggtgcagatcgggaccctccgcc-cgccccgacgggccggatc 70
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 71 ccgccttgcaccaagtgaatcggagccg 98
>41887_hvu-MIR168:mirbase
Length = 106
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 60
||||||||||||||||||||||||||||||||| ||||| || | |||||| | ||||
Sbjct: 12 ccgcctcgggctcgcttggtgcagatcgggaccctccgcc-cgccccgacgggccggatc 70
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 71 ccgccttgcaccaagtgaatcggagccg 98
>42742_zma-MIR168b:mirbase
Length = 104
Score = 89.7 bits (45), Expect = 3e-19
Identities = 75/84 (89%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 5 ctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatcccgc 64
||||||||||||||||||||||||||||| |||||| | | |||||||| ||||||||
Sbjct: 14 ctcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatcccgc 71
Query: 65 cttgcaccaagtgaatccgagccg 88
|||||| |||||||||| ||||||
Sbjct: 72 cttgcatcaagtgaatcggagccg 95
>41753_bdi-MIR168:mirbase
Length = 136
Score = 87.7 bits (44), Expect = 1e-18
Identities = 77/88 (87%)
Strand = Plus / Plus
Query: 1 ccgcctcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatc 60
||||||||||||||||||||||||||||||||| ||||| | | | |||| | ||||
Sbjct: 20 ccgcctcgggctcgcttggtgcagatcgggaccctccgcccgcccccgccgggccggatc 79
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 80 ccgccttgcaccaagtgaatcggagccg 107
>41962_osa-MIR168a:mirbase
Length = 87
Score = 79.8 bits (40), Expect = 3e-16
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 2 cgcctcgggctcgcttggtgcagatcgggacctgccgccg-tgctcggacgggacagatc 60
|||||||||||||||||||||||||||||||| ||||||| ||| | ||| | ||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgct-gccggggccggatc 59
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 60 ccgccttgcaccaagtgaatcggagccg 87
>41961_osa-MIR168a:mirbase
Length = 87
Score = 79.8 bits (40), Expect = 3e-16
Identities = 78/88 (88%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 2 cgcctcgggctcgcttggtgcagatcgggacctgccgccg-tgctcggacgggacagatc 60
|||||||||||||||||||||||||||||||| ||||||| ||| | ||| | ||||
Sbjct: 1 cgcctcgggctcgcttggtgcagatcgggacccgccgccgccgct-gccggggccggatc 59
Query: 61 ccgccttgcaccaagtgaatccgagccg 88
||||||||||||||||||||| ||||||
Sbjct: 60 ccgccttgcaccaagtgaatcggagccg 87
>42460_sof-MIR168b:mirbase
Length = 103
Score = 75.8 bits (38), Expect = 5e-15
Identities = 72/81 (88%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 8 gggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatcccgcctt 67
|||||||||||| ||||||||||||| |||||| || |||||||| |||||||||||
Sbjct: 17 gggctcgcttgg-gcagatcgggacccgccgcccggcc--gacgggacggatcccgcctt 73
Query: 68 gcaccaagtgaatccgagccg 88
|||||||||||||| ||||||
Sbjct: 74 gcaccaagtgaatcggagccg 94
>40271_bna-MIR168:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 6e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 57 gatcccgccttgcaccaagtgaatccgag 85
|||||||||||| | ||||||||||||||
Sbjct: 95 gatcccgccttgtatcaagtgaatccgag 123
