miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38750_cte-mir-100:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 ggaacccgtagaaccgaacttgtgttt 46
|||||||||| ||||||||||||||||
Sbjct: 19 ggaacccgtacaaccgaacttgtgttt 45
>35190_aae-mir-100:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 19 aggaacccgtagaaccgaacttgtg 43
||||||||||||| |||||||||||
Sbjct: 28 aggaacccgtagatccgaacttgtg 52
>24672_bfl-mir-100:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aacccgtagaaccgaacttgtgtt 45
|||||||||| |||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgtt 44
>34877_sko-mir-100:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aacccgtagaaccgaacttgtgtt 45
|||||||||| |||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgtt 44
>35010_dpu-mir-100:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 gaacccgtagaaccgaacttgtgt 44
||||||||||| ||||||||||||
Sbjct: 20 gaacccgtagatccgaacttgtgt 43
>35537_bmo-mir-100:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 ggaacccgtagaaccgaacttgtg 43
|||||||||||| |||||||||||
Sbjct: 19 ggaacccgtagatccgaacttgtg 42
>36020_cqu-mir-100:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 ggaacccgtagaaccgaacttgtg 43
|||||||||||| |||||||||||
Sbjct: 21 ggaacccgtagatccgaacttgtg 44
>37737_tca-mir-100:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 ggaacccgtagaaccgaacttgtg 43
|||||||||||| |||||||||||
Sbjct: 8 ggaacccgtagatccgaacttgtg 31
>37738_tca-mir-100:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 ggaacccgtagaaccgaacttgtg 43
|||||||||||| |||||||||||
Sbjct: 8 ggaacccgtagatccgaacttgtg 31
>38112_bma-mir-100b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 22 aacccgtagaaccgaacttgtgtt 45
|||||||||| |||||||||||||
Sbjct: 21 aacccgtagatccgaacttgtgtt 44
