miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>35005_dpu-mir-34:mirbase
Length = 101
Score = 176 bits (89), Expect = 2e-45
Identities = 95/97 (97%)
Strand = Plus / Plus
Query: 4 aaaagtgtattgatggttggcagtgtggctagctggttgtgaaatatttaattgaatcca 63
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 5 aaaagtgtattgatggttggcagtgtggttagctggttgtgaaatatttacttgaatcca 64
Query: 64 cagccactatccaaactgtccactgtcgatgacacga 100
|||||||||||||||||||||||||||||||||||||
Sbjct: 65 cagccactatccaaactgtccactgtcgatgacacga 101
>38739_cte-mir-34:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 tggcagtgtggctagctggttgtgaa 46
||||||||||| ||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtgaa 47
>35531_bmo-mir-34:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 gttggcagtgtggctagctggttgtg 44
||||||||||||| ||||||||||||
Sbjct: 19 gttggcagtgtggttagctggttgtg 44
>37576_ngi-mir-34:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 gttggcagtgtggctagctggttgtg 44
||||||||||||| ||||||||||||
Sbjct: 6 gttggcagtgtggttagctggttgtg 31
>37608_nlo-mir-34:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 gttggcagtgtggctagctggttgtg 44
||||||||||||| ||||||||||||
Sbjct: 6 gttggcagtgtggttagctggttgtg 31
>37645_nvi-mir-34:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 gttggcagtgtggctagctggttgtg 44
||||||||||||| ||||||||||||
Sbjct: 19 gttggcagtgtggttagctggttgtg 44
>36101_dan-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>36179_der-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>36267_dgr-mir-34:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>36373_dme-mir-34:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtg 40
>36374_dme-mir-34:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtg 40
>36777_dmo-mir-34:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>36850_dpe-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>36926_dps-mir-34:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 16 ttggcagtgtggttagctggttgtg 40
>37139_dse-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>37215_dsi-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>37353_dvi-mir-34:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>37430_dwi-mir-34:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>37507_dya-mir-34:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 ttggcagtgtggctagctggttgtg 44
|||||||||||| ||||||||||||
Sbjct: 13 ttggcagtgtggttagctggttgtg 37
>35184_aae-mir-34:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tggcagtgtggctagctggttgtg 44
||||||||||| ||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgtg 39
>35283_aga-mir-34:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tggcagtgtggctagctggttgtg 44
||||||||||| ||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgtg 40
>37723_tca-mir-34:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tggcagtgtggctagctggttgtg 44
||||||||||| ||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtg 34
>37724_tca-mir-34:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tggcagtgtggctagctggttgtg 44
||||||||||| ||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgtg 34
