miRNEST 2.0, an integrative microRNA resource :: BLAST
>40312_bra-MIR160a:mirbase
Length = 127
Score = 252 bits (127), Expect = 6e-68
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 4 tatgtgtagttgtataagatgtgtatgcctggctccctgtatgccatcctctaagctcat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgtgtagttgtataagatgtgtatgcctggctccctgtatgccatcctctaagctcat 60
Query: 64 cgaccattgatgacctccgtgaatggcgtatgaggagccatgcatattttcatatacatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaccattgatgacctccgtgaatggcgtatgaggagccatgcatattttcatatacatt 120
Query: 124 tacatac 130
|||||||
Sbjct: 121 tacatac 127
>39807_aly-MIR160a:mirbase
Length = 158
Score = 107 bits (54), Expect = 2e-24
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 25 tgtatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtg 84
|||||||||||||||||||||||||| || |||||||||| || |||||||||||||
Sbjct: 38 tgtatgcctggctccctgtatgccatatgctgagctcatcgagtatcgatgacctccgtg 97
Query: 85 aatggcgtatgaggagccatgcatat 110
|||||||||||||||||||||||||
Sbjct: 98 gatggcgtatgaggagccatgcatat 123
>40019_ath-MIR160a:mirbase
Length = 85
Score = 97.6 bits (49), Expect = 2e-21
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 26 gtatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtga 85
||||||||||||||||||||||||| || ||| |||||| || |||||||||||||
Sbjct: 1 gtatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgg 60
Query: 86 atggcgtatgaggagccatgcatat 110
|||||||||||||||||||||||||
Sbjct: 61 atggcgtatgaggagccatgcatat 85
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 gatgacctccgtgaatggcgtatgaggagccatgcatatt 111
|||| |||||||| ||||||||||||||||||||||||||
Sbjct: 55 gatggcctccgtggatggcgtatgaggagccatgcatatt 94
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 gatgacctccgtgaatggcgtatgaggagccatgcatatt 111
|||| |||||||| ||||||||||||||||||||||||||
Sbjct: 55 gatggcctccgtggatggcgtatgaggagccatgcatatt 94
>41219_csi-MIR160:mirbase
Length = 143
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 72 gatgacctccgtgaatggcgtatgaggagccatgcatatt 111
|||| |||||||| ||||||||||||||||||||||||||
Sbjct: 77 gatggcctccgtggatggcgtatgaggagccatgcatatt 116
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 2e-09
Identities = 72/85 (84%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatcctctaagctcatcgac-cattgatgacctccgtga 85
|||||||||||||||||||||||| | ||| || || | ||| |||| ||| ||||
Sbjct: 9 tatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgg 68
Query: 86 atggcgtatgaggagccatgcatat 110
|||||||||||||||||||||||||
Sbjct: 69 atggcgtatgaggagccatgcatat 93
>40436_gma-MIR160:mirbase
Length = 119
Score = 56.0 bits (28), Expect = 7e-09
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccatcctcta-agctcatcgac-cattgatgacctccgtgaa 86
|||||||||||||||||||||| | || |||||||||| ||| ||||||| ||| |
Sbjct: 21 tgcctggctccctgtatgccatt-tgtagagctcatcgaagcatcaatgacctttgtgga 79
Query: 87 tggcgtatgaggagccatgcatattttcatatacat 122
||||||||||||||||| ||||| ||||||||||||
Sbjct: 80 tggcgtatgaggagccaagcata-tttcatatacat 114
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 25 tgtatgcctggctccctgtatgccat 50
||||||||||||||||||||||||||
Sbjct: 17 tgtatgcctggctccctgtatgccat 42
>41529_sly-MIR160a:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 83 tgaatggcgtatgaggagccatgcatatt 111
||||||||||||||||||||| |||||||
Sbjct: 78 tgaatggcgtatgaggagccaagcatatt 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccat 50
||||||||||||||||||||||||
Sbjct: 18 tatgcctggctccctgtatgccat 41
>42705_zma-MIR160e:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 7 tatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 20 tatgcctggctccctgtatgcca 42
>41926_osa-MIR160d:mirbase
Length = 142
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 6 tatgcctggctccctgtatgcca 28
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 30 tatgcctggctccctgtatgcca 52
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgccat 50
|||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccat 32
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 atgacctccgtgaatggcgtatgaggagccatgcatatt 111
||||||| ||| |||||||||||||||||| |||||||
Sbjct: 51 atgacctttgtggatggcgtatgaggagccaagcatatt 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 atgacctccgtgaatggcgtatgaggagccatgcatatt 111
||||||| ||| |||||||||||||||||| |||||||
Sbjct: 51 atgacctttgtggatggcgtatgaggagccaagcatatt 89
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>39731_smo-MIR160a:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccatc 51
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatc 33
>39375_pab-MIR160b:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccatc 51
|||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccatc 42
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcca 49
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>42706_zma-MIR160f:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcc 48
||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcc 40
>42702_zma-MIR160b:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 24 gtgtatgcctggctccctgtatgcca 49
|||| |||||||||||||||||||||
Sbjct: 16 gtgtgtgcctggctccctgtatgcca 41
>41927_osa-MIR160e:mirbase
Length = 114
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcc 48
||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcc 30
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcca 49
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccat 42
>40339_rco-MIR160a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40399_ahy-MIR160:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 atgtgtatgcctggctccctgtatgccat 50
|||||| |||||||||||||| |||||||
Sbjct: 14 atgtgtctgcctggctccctgaatgccat 42
>40398_ahy-MIR160:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 atgtgtatgcctggctccctgtatgccat 50
|||||| |||||||||||||| |||||||
Sbjct: 14 atgtgtctgcctggctccctgaatgccat 42
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
