miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40312_bra-MIR160a:mirbase
          Length = 127

 Score =  252 bits (127), Expect = 6e-68
 Identities = 127/127 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   tatgtgtagttgtataagatgtgtatgcctggctccctgtatgccatcctctaagctcat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tatgtgtagttgtataagatgtgtatgcctggctccctgtatgccatcctctaagctcat 60

                                                                       
Query: 65  cgaccattgatgacctccgtgaatggcgtatgaggagccatgcatattttcatatacatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cgaccattgatgacctccgtgaatggcgtatgaggagccatgcatattttcatatacatt 120

                  
Query: 125 tacatac 131
           |||||||
Sbjct: 121 tacatac 127




>39807_aly-MIR160a:mirbase
          Length = 158

 Score =  107 bits (54), Expect = 2e-24
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                       
Query: 26  tgtatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtg 85
           ||||||||||||||||||||||||||   || ||||||||||  || |||||||||||||
Sbjct: 38  tgtatgcctggctccctgtatgccatatgctgagctcatcgagtatcgatgacctccgtg 97

                                     
Query: 86  aatggcgtatgaggagccatgcatat 111
            |||||||||||||||||||||||||
Sbjct: 98  gatggcgtatgaggagccatgcatat 123




>40019_ath-MIR160a:mirbase
          Length = 85

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                       
Query: 27  gtatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtga 86
           |||||||||||||||||||||||||   || ||| ||||||  || ||||||||||||| 
Sbjct: 1   gtatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgg 60

                                    
Query: 87  atggcgtatgaggagccatgcatat 111
           |||||||||||||||||||||||||
Sbjct: 61  atggcgtatgaggagccatgcatat 85




>41307_ptc-MIR160c:mirbase
          Length = 98

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 73  gatgacctccgtgaatggcgtatgaggagccatgcatatt 112
           |||| |||||||| ||||||||||||||||||||||||||
Sbjct: 55  gatggcctccgtggatggcgtatgaggagccatgcatatt 94




>41306_ptc-MIR160b:mirbase
          Length = 98

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 73  gatgacctccgtgaatggcgtatgaggagccatgcatatt 112
           |||| |||||||| ||||||||||||||||||||||||||
Sbjct: 55  gatggcctccgtggatggcgtatgaggagccatgcatatt 94




>41219_csi-MIR160:mirbase
          Length = 143

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 73  gatgacctccgtgaatggcgtatgaggagccatgcatatt 112
           |||| |||||||| ||||||||||||||||||||||||||
Sbjct: 77  gatggcctccgtggatggcgtatgaggagccatgcatatt 116




>41577_vvi-MIR160e:mirbase
          Length = 102

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 72/85 (84%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  tatgcctggctccctgtatgccatcctctaagctcatcgac-cattgatgacctccgtga 86
           ||||||||||||||||||||||||   |  ||| || || | ||| |||| ||| |||| 
Sbjct: 9   tatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtgg 68

                                    
Query: 87  atggcgtatgaggagccatgcatat 111
           |||||||||||||||||||||||||
Sbjct: 69  atggcgtatgaggagccatgcatat 93




>40436_gma-MIR160:mirbase
          Length = 119

 Score = 56.0 bits (28), Expect = 7e-09
 Identities = 83/96 (86%), Gaps = 4/96 (4%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgcctggctccctgtatgccatcctcta-agctcatcgac-cattgatgacctccgtgaa 87
           ||||||||||||||||||||||  | || ||||||||||  |||  |||||||  ||| |
Sbjct: 21  tgcctggctccctgtatgccatt-tgtagagctcatcgaagcatcaatgacctttgtgga 79

                                               
Query: 88  tggcgtatgaggagccatgcatattttcatatacat 123
           ||||||||||||||||| ||||| ||||||||||||
Sbjct: 80  tggcgtatgaggagccaagcata-tttcatatacat 114




>41088_tcc-MIR160b:mirbase
          Length = 120

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 26 tgtatgcctggctccctgtatgccat 51
          ||||||||||||||||||||||||||
Sbjct: 17 tgtatgcctggctccctgtatgccat 42




>41529_sly-MIR160a:mirbase
          Length = 129

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 84  tgaatggcgtatgaggagccatgcatatt 112
           ||||||||||||||||||||| |||||||
Sbjct: 78  tgaatggcgtatgaggagccaagcatatt 106



 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 28 tatgcctggctccctgtatgccat 51
          ||||||||||||||||||||||||
Sbjct: 18 tatgcctggctccctgtatgccat 41




>42705_zma-MIR160e:mirbase
          Length = 94

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 7  tatgcctggctccctgtatgcca 29




>42704_zma-MIR160d:mirbase
          Length = 142

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcca 41




>42636_tae-MIR160:mirbase
          Length = 148

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 20 tatgcctggctccctgtatgcca 42




>41926_osa-MIR160d:mirbase
          Length = 142

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 6  tatgcctggctccctgtatgcca 28




>41731_bdi-MIR160a:mirbase
          Length = 175

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 30 tatgcctggctccctgtatgcca 52




>41576_vvi-MIR160d:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 29 atgcctggctccctgtatgccat 51
          |||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccat 32




>41308_ptc-MIR160d:mirbase
          Length = 103

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>41305_ptc-MIR160a:mirbase
          Length = 102

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcca 31




>40662_mtr-MIR160e:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 74  atgacctccgtgaatggcgtatgaggagccatgcatatt 112
           |||||||  ||| |||||||||||||||||| |||||||
Sbjct: 51  atgacctttgtggatggcgtatgaggagccaagcatatt 89



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tgcctggctccctgtatgccat 51
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>40659_mtr-MIR160b:mirbase
          Length = 91

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 74  atgacctccgtgaatggcgtatgaggagccatgcatatt 112
           |||||||  ||| |||||||||||||||||| |||||||
Sbjct: 51  atgacctttgtggatggcgtatgaggagccaagcatatt 89



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tgcctggctccctgtatgccat 51
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>40340_rco-MIR160b:mirbase
          Length = 96

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 4  tatgcctggctccctgtatgcca 26




>40021_ath-MIR160c:mirbase
          Length = 89

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 3  tatgcctggctccctgtatgcca 25




>39809_aly-MIR160c:mirbase
          Length = 119

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 28 tatgcctggctccctgtatgcca 50
          |||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44




>39731_smo-MIR160a:mirbase
          Length = 106

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tgcctggctccctgtatgccatc 52
          |||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatc 33




>39375_pab-MIR160b:mirbase
          Length = 116

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 30 tgcctggctccctgtatgccatc 52
          |||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccatc 42




>42707_zma-MIR160g:mirbase
          Length = 86

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atgcctggctccctgtatgcca 50
          ||||||||||||||||||||||
Sbjct: 1  atgcctggctccctgtatgcca 22




>42706_zma-MIR160f:mirbase
          Length = 116

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tatgcctggctccctgtatgcc 49
          ||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgcc 40




>42702_zma-MIR160b:mirbase
          Length = 121

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 25 gtgtatgcctggctccctgtatgcca 50
          |||| |||||||||||||||||||||
Sbjct: 16 gtgtgtgcctggctccctgtatgcca 41




>41927_osa-MIR160e:mirbase
          Length = 114

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 28 tatgcctggctccctgtatgcc 49
          ||||||||||||||||||||||
Sbjct: 9  tatgcctggctccctgtatgcc 30




>41869_far-MIR160:mirbase
          Length = 148

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 29 atgcctggctccctgtatgcca 50
          ||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73




>41166_aqc-MIR160b:mirbase
          Length = 82

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tgcctggctccctgtatgccat 51
          ||||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgccat 22




>40661_mtr-MIR160d:mirbase
          Length = 91

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tgcctggctccctgtatgccat 51
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>40658_mtr-MIR160:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tgcctggctccctgtatgccat 51
          ||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccat 42




>40339_rco-MIR160a:mirbase
          Length = 92

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 30 tgcctggctccctgtatgccat 51
          ||||||||||||||||||||||
Sbjct: 6  tgcctggctccctgtatgccat 27




>42703_zma-MIR160c:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>42701_zma-MIR160a:mirbase
          Length = 104

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30




>42677_ttu-MIR160:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 9  tgcctggctccctgtatgcca 29




>42500_sbi-MIR160e:mirbase
          Length = 95

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42499_sbi-MIR160d:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42498_sbi-MIR160c:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42497_sbi-MIR160b:mirbase
          Length = 82

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>42496_sbi-MIR160a:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 1  tgcctggctccctgtatgcca 21




>41925_osa-MIR160c:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 7  tgcctggctccctgtatgcca 27




>41924_osa-MIR160b:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>41923_osa-MIR160a:mirbase
          Length = 88

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 4  tgcctggctccctgtatgcca 24




>41734_bdi-MIR160d:mirbase
          Length = 150

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41733_bdi-MIR160c:mirbase
          Length = 148

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41732_bdi-MIR160b:mirbase
          Length = 146

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51




>41575_vvi-MIR160c:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>40399_ahy-MIR160:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 23 atgtgtatgcctggctccctgtatgccat 51
          |||||| |||||||||||||| |||||||
Sbjct: 14 atgtgtctgcctggctccctgaatgccat 42




>40398_ahy-MIR160:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 23 atgtgtatgcctggctccctgtatgccat 51
          |||||| |||||||||||||| |||||||
Sbjct: 14 atgtgtctgcctggctccctgaatgccat 42




>40020_ath-MIR160b:mirbase
          Length = 89

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 5  tgcctggctccctgtatgcca 25




>39808_aly-MIR160b:mirbase
          Length = 125

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41




>39732_smo-MIR160b:mirbase
          Length = 108

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33




>39460_ppt-MIR160f:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39459_ppt-MIR160e:mirbase
          Length = 138

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50




>39455_ppt-MIR160a:mirbase
          Length = 99

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31




>39374_pab-MIR160a:mirbase
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 30 tgcctggctccctgtatgcca 50
          |||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34