miRNEST 2.0, an integrative microRNA resource :: BLAST
>40043_ath-MIR168a:mirbase
Length = 138
Score = 81.8 bits (41), Expect = 1e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 88 ttattggtttgtgagcaggtattggctcccgccttgcatcaattgaatcggagcctc 144
||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 76 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcggatcctc 132
>39832_aly-MIR168a:mirbase
Length = 155
Score = 79.8 bits (40), Expect = 6e-16
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 88 ttattggtttgtgagcaggtattggctcccgccttgcatcaattgaatcgga 139
||||||||||||||||||| ||||| |||||||||||||||| |||||||||
Sbjct: 82 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 133
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 16 tcaccgtggggctcggattcgcttggtgcaggtcggga 53
||||||| ||||||||||||||||||||||||||||||
Sbjct: 6 tcaccgtcgggctcggattcgcttggtgcaggtcggga 43
>40044_ath-MIR168b:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 27 ctcggattcgcttggtgcaggtcggga 53
|||||||||||||||||||||||||||
Sbjct: 12 ctcggattcgcttggtgcaggtcggga 38
>39833_aly-MIR168b:mirbase
Length = 176
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 27 ctcggattcgcttggtgcaggtcggga 53
|||||||||||||||||||||||||||
Sbjct: 36 ctcggattcgcttggtgcaggtcggga 62
>42742_zma-MIR168b:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcggga 30
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gattcgcttggtgcaggtcggga 53
|||||||||||||||||||||||
Sbjct: 8 gattcgcttggtgcaggtcggga 30
>41215_crt-MIR168:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 136 attggatcccgccttgcatcaactgaatcggag 168
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 19 attcgcttggtgcaggtcggga 40
>41210_ccl-MIR168:mirbase
Length = 176
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 135 attggatcccgccttgcatcaactgaatcggag 167
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 18 attcgcttggtgcaggtcggga 39
>41101_tcc-MIR168:mirbase
Length = 167
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 120 attggatcccgccttgcatcaactgaatcggag 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 19 attcgcttggtgcaggtcggga 40
>40448_gma-MIR168:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggga 38
>41596_vvi-MIR168:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggag 140
|||||||||||||||| ||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcggga 30
>40355_rco-MIR168:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 4 attcgcttggtgcaggtcggga 25
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcg 137
||||| |||||||||||||||| |||||||
Sbjct: 99 attggatcccgccttgcatcaactgaatcg 128
>40271_bna-MIR168:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 91 ttggtttgtgagcaggtattggctcccgccttgcatcaattgaatc 136
|||| ||||||||||| || || |||||||||| ||||| ||||||
Sbjct: 74 ttggcttgtgagcagggatcggatcccgccttgtatcaagtgaatc 119
>42741_zma-MIR168a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>42470_ssp-MIR168a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 63 tcccgccttgcaccaagtgaatcggagcc 91
>42460_sof-MIR168b:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 65 tcccgccttgcaccaagtgaatcggagcc 93
>42459_sof-MIR168a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>41962_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41961_osa-MIR168a:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>41888_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41887_hvu-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 69 tcccgccttgcaccaagtgaatcggagcc 97
>41753_bdi-MIR168:mirbase
Length = 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 78 tcccgccttgcaccaagtgaatcggagcc 106