miRNEST 2.0, an integrative microRNA resource :: BLAST
>40298_bna-MIR397b:mirbase
Length = 96
Score = 107 bits (54), Expect = 2e-24
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 8 gaacatcattgagtgcagcgttgatgtgatttacnnnnnnnn---attgttgaatggatt 64
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gaacatcattgagtgcagcgttgatgtgatttacttatctttttcattgttgaatggatt 60
Query: 65 aaagcaatttacatcaatgttggctcaattatgttt 100
||||||||||||||||| ||||||||||||||||||
Sbjct: 61 aaagcaatttacatcaacgttggctcaattatgttt 96
>40297_bna-MIR397a:mirbase
Length = 96
Score = 107 bits (54), Expect = 2e-24
Identities = 84/96 (87%), Gaps = 3/96 (3%)
Strand = Plus / Plus
Query: 8 gaacatcattgagtgcagcgttgatgtgatttacnnnnnnnn---attgttgaatggatt 64
|||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 gaacatcattgagtgcagcgttgatgtgatttacttctctttttcattgttgaatggatt 60
Query: 65 aaagcaatttacatcaatgttggctcaattatgttt 100
||||||||||||||||| ||||||||||||||||||
Sbjct: 61 aaagcaatttacatcaacgttggctcaattatgttt 96
>39879_aly-MIR397a:mirbase
Length = 126
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1 tttgaatgaacatcattgagtgcagcgttgatgtgattt 39
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 8 tttgaatgaacatcattgagtgcagcgttgatgtaattt 46
>40087_ath-MIR397a:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 3 tgaatgaacatcattgagtgcagcgttgatgtgattt 39
|||||||||||||||||||||||||||||||| ||||
Sbjct: 1 tgaatgaacatcattgagtgcagcgttgatgtaattt 37
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 50 attgttgaatggattaaagcaatttacatcaatgttg-gctcaattatgtttttct 104
|||||||||||||||||| |||||| | || |||| ||||||||||||||||||
Sbjct: 51 attgttgaatggattaaaagaatttataccagcgttgcgctcaattatgtttttct 106
>39880_aly-MIR397b:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 tttgaatgaacatcattgagtgcagcgttgatgt 34
||||||| ||||||||||||||||||||||||||
Sbjct: 7 tttgaataaacatcattgagtgcagcgttgatgt 40
>40088_ath-MIR397b:mirbase
Length = 109
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 3 tgaatgaacatcattgagtgcagcgttgatgtgattt 39
|||||||||||||||||||||| ||||||||| ||||
Sbjct: 1 tgaatgaacatcattgagtgcatcgttgatgtaattt 37
>41664_vvi-MIR397a:mirbase
Length = 118
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 aacatcattgagtgcagcgttgatg 33
|||||||||||||||||||||||||
Sbjct: 7 aacatcattgagtgcagcgttgatg 31
>41244_csi-MIR397:mirbase
Length = 156
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 aacatcattgagtgcagcgttgatg 33
|||||||||||||||||||||||||
Sbjct: 14 aacatcattgagtgcagcgttgatg 38
>40380_rco-MIR397:mirbase
Length = 157
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 aacatcattgagtgcagcgttgatg 33
|||||||||||||||||||||||||
Sbjct: 2 aacatcattgagtgcagcgttgatg 26
>41143_tcc-MIR397:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 acatcattgagtgcagcgttgatg 33
||||||||||||||||||||||||
Sbjct: 18 acatcattgagtgcagcgttgatg 41
>42037_osa-MIR397a:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 catcattgagtgcagcgttgatg 33
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
>41798_bdi-MIR397b:mirbase
Length = 292
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 catcattgagtgcagcgttgatg 33
|||||||||||||||||||||||
Sbjct: 30 catcattgagtgcagcgttgatg 52
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 catcattgagtgcagcgttgatg 33
|||||||||||||||||||||||
Sbjct: 176 catcattgagtgcagcgttgatg 198
>41797_bdi-MIR397a:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 catcattgagtgcagcgttgatg 33
|||||||||||||||||||||||
Sbjct: 16 catcattgagtgcagcgttgatg 38
>41442_ptc-MIR397a:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 catcattgagtgcagcgttgatg 33
|||||||||||||||||||||||
Sbjct: 9 catcattgagtgcagcgttgatg 31
>39382_pab-MIR397:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 acatcattgagtgcagcgttga 31
||||||||||||||||||||||
Sbjct: 14 acatcattgagtgcagcgttga 35
>42587_sbi-MIR397:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 tcattgagtgcagcgttgatg 33
|||||||||||||||||||||
Sbjct: 1 tcattgagtgcagcgttgatg 21
>41547_sly-MIR397:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 aacatcattgagtgcagcgttgatg 33
||||| |||||||||||||||||||
Sbjct: 14 aacatgattgagtgcagcgttgatg 38
>41443_ptc-MIR397b:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 14 cattgagtgcagcgttgatg 33
||||||||||||||||||||
Sbjct: 12 cattgagtgcagcgttgatg 31
