miRNEST 2.0, an integrative microRNA resource :: BLAST
>34678_tni-let-7e:mirbase
Length = 100
Score = 127 bits (64), Expect = 2e-30
Identities = 85/92 (92%)
Strand = Plus / Minus
Query: 14 cttgggaaagacagtagattgtatagttatttaaaaaagaggttacaaaaccccacaact 73
|||||||||||||||||||||||||||||| | | | |||||| ||| ||||||||||||
Sbjct: 92 cttgggaaagacagtagattgtatagttatctcacatagaggtcacacaaccccacaact 33
Query: 74 attcaatctactacctcagctccaaggacagc 105
|||||||||||||||||||| |||||||||||
Sbjct: 32 attcaatctactacctcagccccaaggacagc 1
>34530_fru-let-7e:mirbase
Length = 100
Score = 111 bits (56), Expect = 1e-25
Identities = 80/88 (90%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttatttaaaaaagaggttacaaaaccccacaactattc 77
|||||||||||||||||||||||||| | | ||||||| ||| ||||||||||||||||
Sbjct: 88 ggaaagacagtagattgtatagttatctcactaagaggtcacacaaccccacaactattc 29
Query: 78 aatctactacctcagctccaaggacagc 105
|||||||||||||| | |||||||||||
Sbjct: 28 aatctactacctcaaccccaaggacagc 1
>31412_oan-let-7e:mirbase
Length = 122
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctcagctccaaggacag 104
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 58 accccacaactattcaatctactacctcagcctcaaggacag 17
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagtta 42
|||||||||||||||||||||||||
Sbjct: 101 ggaaagacagtagattgtatagtta 77
>34176_dre-let-7e-1:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 66 ccacaactattcaatctactacctcagctccaaggacagc 105
|||||||||||||||||||||||||||| ||||| |||||
Sbjct: 40 ccacaactattcaatctactacctcagccccaagaacagc 1
>34177_dre-let-7e-2:mirbase
Length = 100
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 66 ccacaactattcaatctactacctcagctccaaggacagc 105
|||||||||||||||||||||||||||| ||||| |||||
Sbjct: 40 ccacaactattcaatctactacctcagccccaagaacagc 1
>25878_gga-let-7k:mirbase
Length = 83
Score = 58.0 bits (29), Expect = 1e-09
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttatttaaaaaagaggttacaaaaccccacaactattc 77
||||||||||||||||||||||||| | ||| |||| || | | ||||||||||||
Sbjct: 75 ggaaagacagtagattgtatagttagctcaaagggaggatagga--ctccacaactattc 18
Query: 78 aatctactacctcagc 93
||||||||||||||||
Sbjct: 17 aatctactacctcagc 2
>26383_tgu-let-7e:mirbase
Length = 92
Score = 58.0 bits (29), Expect = 1e-09
Identities = 65/76 (85%), Gaps = 2/76 (2%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttatttaaaaaagaggttacaaaaccccacaactattc 77
||||||||||||||||||||||||| | | | |||| || | || ||||||||||||
Sbjct: 82 ggaaagacagtagattgtatagttagctcagagggagg--accagactccacaactattc 25
Query: 78 aatctactacctcagc 93
||||||||||||||||
Sbjct: 24 aatctactacctcagc 9
>25680_xtr-let-7e-2:mirbase
Length = 93
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 82 ggaaagacagtagattgtatagttat 57
>25868_gga-let-7a-1:mirbase
Length = 90
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 85 ggaaagacagtagattgtatagttat 60
>25870_gga-let-7a-3:mirbase
Length = 76
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 75 ggaaagacagtagattgtatagttat 50
>26375_tgu-let-7a-1:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 82 ggaaagacagtagattgtatagttat 57
>27629_mml-let-7a-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 78 ggaaagacagtagattgtatagttat 53
>27631_mml-let-7a-3:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 73 ggaaagacagtagattgtatagttat 48
>28339_hsa-let-7a-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 78 ggaaagacagtagattgtatagttat 53
>28341_hsa-let-7a-3:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 73 ggaaagacagtagattgtatagttat 48
>30126_ptr-let-7a-1:mirbase
Length = 79
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 77 ggaaagacagtagattgtatagttat 52
>30128_ptr-let-7a-3:mirbase
Length = 73
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 72 ggaaagacagtagattgtatagttat 47
>30731_ppy-let-7a-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 78 ggaaagacagtagattgtatagttat 53
>30733_ppy-let-7a-3:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 73 ggaaagacagtagattgtatagttat 48
>31752_mmu-let-7a-1:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 85 ggaaagacagtagattgtatagttat 60
>32638_rno-let-7a-1:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 85 ggaaagacagtagattgtatagttat 60
>33108_bta-let-7a-1:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 78 ggaaagacagtagattgtatagttat 53
>33110_bta-let-7a-3:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 73 ggaaagacagtagattgtatagttat 48
>33899_ssc-let-7a-2:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagttat 43
||||||||||||||||||||||||||
Sbjct: 83 ggaaagacagtagattgtatagttat 58
>26605_cfa-let-7a-1:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagtta 42
|||||||||||||||||||||||||
Sbjct: 69 ggaaagacagtagattgtatagtta 45
>26610_cfa-let-7f:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 29 accccacaactatacaatctactacctca 1
>26930_eca-let-7a-2:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagtta 42
|||||||||||||||||||||||||
Sbjct: 73 ggaaagacagtagattgtatagtta 49
>26934_eca-let-7f:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 35 accccacaactatacaatctactacctca 7
>27318_mdo-let-7a-1:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 gaaagacagtagattgtatagttat 43
|||||||||||||||||||||||||
Sbjct: 86 gaaagacagtagattgtatagttat 62
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 35 accccacaactatacaatctactacctca 7
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 35 accccacaactatacaatctactacctca 7
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 35 accccacaactatacaatctactacctca 7
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 34 accccacaactatacaatctactacctca 6
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 35 accccacaactatacaatctactacctca 7
>31756_mmu-let-7c-2:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagtta 42
|||||||||||||||||||||||||
Sbjct: 83 ggaaagacagtagattgtatagtta 59
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 36 accccacaactatacaatctactacctca 8
>32642_rno-let-7c-2:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 18 ggaaagacagtagattgtatagtta 42
|||||||||||||||||||||||||
Sbjct: 83 ggaaagacagtagattgtatagtta 59
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 36 accccacaactatacaatctactacctca 8
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 58 accccacaactatacaatctactacctca 86
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
||||||||||||| |||||||||||||||
Sbjct: 35 accccacaactatacaatctactacctca 7
>27324_mdo-let-7f-2:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 78 tgggaaagacagtagactgtatagttat 51
>27637_mml-let-7f-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>28347_hsa-let-7f-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>30134_ptr-let-7f-2:mirbase
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>30739_ppy-let-7f-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>31414_oan-let-7f-2:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 104 tgggaaagacagtagactgtatagttat 77
>31760_mmu-let-7f-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>32646_rno-let-7f-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>33116_bta-let-7f-2:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>33902_ssc-let-7f:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 81 tgggaaagacagtagactgtatagttat 54
>34180_dre-let-7g-2:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 87 tgggaaagacagtagactgtatagttat 60
>34531_fru-let-7g:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 79 tgggaaagacagtagactgtatagttat 52
>34679_tni-let-7g:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 16 tgggaaagacagtagattgtatagttat 43
|||||||||||||||| |||||||||||
Sbjct: 79 tgggaaagacagtagactgtatagttat 52
>25413_pma-let-7c:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 17 gggaaagacagtagattgtatagttat 43
|||||||||||||||||| ||||||||
Sbjct: 87 gggaaagacagtagattgcatagttat 61
>27320_mdo-let-7a-3:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 17 gggaaagacagtagattgtatagttat 43
||||||||||||||| |||||||||||
Sbjct: 79 gggaaagacagtagactgtatagttat 53
>25409_pma-let-7a-2:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 14 cttgggaaagacagtagattgtatagtta 42
||||||||||| ||||||||||| |||||
Sbjct: 92 cttgggaaagagagtagattgtacagtta 64
>25681_xtr-let-7f:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
|||||| |||||| |||||||||||||||
Sbjct: 36 accccaaaactatacaatctactacctca 8
>25874_gga-let-7f:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
|||| |||||||| |||||||||||||||
Sbjct: 35 accctacaactatacaatctactacctca 7
>26384_tgu-let-7f:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
|||| |||||||| |||||||||||||||
Sbjct: 39 accctacaactatacaatctactacctca 11
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 19 gaaagacagtagattgtatagttat 43
|||||||||||| ||||||||||||
Sbjct: 81 gaaagacagtaggttgtatagttat 57
>34178_dre-let-7f:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 63 accccacaactattcaatctactacctca 91
|||| |||||||| |||||||||||||||
Sbjct: 48 accctacaactatacaatctactacctca 20
