miRNEST 2.0, an integrative microRNA resource :: BLAST
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 168 bits (85), Expect = 8e-43
Identities = 88/89 (98%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaggtcacaatcaacattcattgctgtcggtgggtttaactatgtggacaagctcact 60
Query: 98 gaacaatgaatgcaactgtggccccacat 126
|||||||||||||||||||||||||||||
Sbjct: 61 gaacaatgaatgcaactgtggccccacat 89
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 147 bits (74), Expect = 3e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 42 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 60
Query: 102 aatgaatgcaactg 115
||||||||||||||
Sbjct: 61 aatgaatgcaactg 74
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 145 bits (73), Expect = 1e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 40 aaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactga 99
||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggacaagctcactga 60
Query: 100 acaatgaatgcaactgtggccccac 124
|||||||||||||||||||||||||
Sbjct: 61 acaatgaatgcaactgtggccccac 85
>27579_lla-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 1e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 1e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 145 bits (73), Expect = 1e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 1e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 145 bits (73), Expect = 1e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 145 bits (73), Expect = 1e-35
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 137 bits (69), Expect = 3e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>28223_mne-mir-181b:mirbase
Length = 110
Score = 137 bits (69), Expect = 3e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
|||||||||||||||||||||||||
Sbjct: 82 gaacaatgaatgcaactgtggcccc 106
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 137 bits (69), Expect = 3e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 38 aaaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcact 97
||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 22 aaaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtggacaagctcact 81
Query: 98 gaacaatgaatgcaactgtggcccc 122
||||||||| |||||||||||||||
Sbjct: 82 gaacaatgagtgcaactgtggcccc 106
>31511_oan-mir-181b:mirbase
Length = 110
Score = 129 bits (65), Expect = 7e-31
Identities = 77/81 (95%)
Strand = Plus / Plus
Query: 39 aaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 98
||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 14 aaaggtcccaatgaacattcattgctgtcggtgggtttaactctgaggacaagctcactg 73
Query: 99 aacaatgaatgcaactgtggc 119
||||||||||| |||||||||
Sbjct: 74 aacaatgaatggaactgtggc 94
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 127 bits (64), Expect = 3e-30
Identities = 79/84 (94%)
Strand = Plus / Plus
Query: 39 aaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 98
|||||||||||| |||||||||||||||||||||||| |||| ||| || ||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactg 82
Query: 99 aacaatgaatgcaactgtggcccc 122
||||||||||||||||||||||||
Sbjct: 83 aacaatgaatgcaactgtggcccc 106
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 127 bits (64), Expect = 3e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 42 ggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaac 101
||||||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 1 ggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagacaagctcactgaac 60
Query: 102 aatgaatgcaactgtggccc 121
||||||||||||||||||||
Sbjct: 61 aatgaatgcaactgtggccc 80
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 119 bits (60), Expect = 7e-28
Identities = 75/80 (93%)
Strand = Plus / Plus
Query: 41 aggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactgaa 100
|||||||||| |||||||||||||||||||||||| |||| ||| || ||||||||||||
Sbjct: 1 aggtcacaatcaacattcattgctgtcggtgggttgaactgtgtagaaaagctcactgaa 60
Query: 101 caatgaatgcaactgtggcc 120
||||||||||||||||||||
Sbjct: 61 caatgaatgcaactgtggcc 80
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 109 bits (55), Expect = 6e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 39 aaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 98
|||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 99 aacaatgaatgcaactgtg 117
||| |||||||||||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 109 bits (55), Expect = 6e-25
Identities = 73/79 (92%)
Strand = Plus / Plus
Query: 39 aaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 98
|||||||||||| ||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtttaactgtatggaagagctcactg 60
Query: 99 aacaatgaatgcaactgtg 117
||| |||||||||||||||
Sbjct: 61 aacgatgaatgcaactgtg 79
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 107 bits (54), Expect = 3e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggtttaactatgtggacaagctcactgaacaatgaatgca 111
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttgaactgtgtggacaagctcactgaacaatgaatgca 60
Query: 112 ac 113
||
Sbjct: 61 ac 62
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 77.8 bits (39), Expect = 2e-15
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 40 aaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactga 99
||||||||||| |||||||||||||||||||||||| | || | |||||||| ||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggttgagttaagaacacaagctcgctga 60
Query: 100 acaatgaatgcaactgtggcccc 122
|| ||||||||||||||| ||||
Sbjct: 61 acgatgaatgcaactgtgtcccc 83
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 63.9 bits (32), Expect = 3e-11
Identities = 71/83 (85%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 39 aaaggtcacaatgaacattcattgctgtcggtgggtttaactatgtggacaagctcactg 98
|||||||| ||| |||||||||||||||||||||||||| ||| | ||||| |||
Sbjct: 24 aaaggtcataatcaacattcattgctgtcggtgggtttagtcttgt--aacagctctctg 81
Query: 99 aacaatgaatgcaactgtggccc 121
||||||||||| |||||||||||
Sbjct: 82 aacaatgaatgtaactgtggccc 104
>27772_mml-mir-181d:mirbase
Length = 137
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 40 aaggtcacaatgaacattcattgctgtcggtgggtt 75
||||||||||| ||||||||||| ||||||||||||
Sbjct: 24 aaggtcacaatcaacattcattgttgtcggtgggtt 59
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 40 aaggtcacaatgaacattcattgctgtcggtgggtt 75
||||||||||| ||||||||||| ||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggtt 58
>33249_bta-mir-181d:mirbase
Length = 113
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 40 aaggtcacaatgaacattcattgctgtcggtgggtt 75
||||||||||| ||||||||||| ||||||||||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggtt 58
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 41 aggtcacaatgaacattcattgctgtcggtgggtt 75
|||||||||| ||||||||||| ||||||||||||
Sbjct: 25 aggtcacaatcaacattcattgttgtcggtgggtt 59
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 41 aggtcacaatgaacattcattgctgtcggtgggtt 75
|||||||||| ||||||||||| ||||||||||||
Sbjct: 24 aggtcacaatcaacattcattgttgtcggtgggtt 58
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 caatgaacattcattgctgtcggtgggttt 76
|||| |||||||||||||||||||||||||
Sbjct: 11 caatcaacattcattgctgtcggtgggttt 40
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 caatgaacattcattgctgtcggtgggttt 76
|||| |||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggttt 35
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 1e-07
Identities = 53/61 (86%), Gaps = 2/61 (3%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggtttaactatgtggacaagctcactgaacaatgaatgca 111
||||||||||||||||||||||||| | |||| || | |||||||| |||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtttga--atgtcaaccaactcactgatcaatgaatgca 73
Query: 112 a 112
|
Sbjct: 74 a 74
>32767_rno-mir-181d:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 42 ggtcacaatgaacattcattgctgtcggtgggtt 75
||||||||| ||||||||||| ||||||||||||
Sbjct: 1 ggtcacaattaacattcattgttgtcggtgggtt 34
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 caatgaacattcattgctgtcggtgggttt 76
|||| |||||||||||||||||||||||||
Sbjct: 11 caataaacattcattgctgtcggtgggttt 40
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 caatgaacattcattgctgtcggtgggttt 76
|||| |||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggttt 35
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 47 caatgaacattcattgctgtcggtgggttt 76
|||| |||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggttt 35
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 47 caatgaacattcattgctgtcggtgggtt 75
|||| ||||||||||||||||||||||||
Sbjct: 9 caataaacattcattgctgtcggtgggtt 37
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttt 25
>27062_eca-mir-181b:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 15 aacattcattgctgtcggtgggttt 39
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>31512_oan-mir-181c:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 43 gtcacaatgaacattcattgctgtcggtgggtt 75
|||||||| |||||||||| |||||||||||||
Sbjct: 10 gtcacaatcaacattcattactgtcggtgggtt 42
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 15 aacattcattgctgtcggtgggttt 39
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggttt 40
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggttt 76
|||||||||||||||||||||||||
Sbjct: 13 aacattcattgctgtcggtgggttt 37
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 tcacaatgaacattcattgctgtcggtgggtt 75
||||||| ||||||||||| ||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggtt 32
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 44 tcacaatgaacattcattgctgtcggtgggtt 75
||||||| ||||||||||| ||||||||||||
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggtt 32
>34332_dre-mir-181c:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 53 acattcattgctgtcggtgggttt 76
||||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggttt 36
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 46 acaatgaacattcattgctgtcggtgggtt 75
||||| ||||||||||| ||||||||||||
Sbjct: 1 acaattaacattcattgttgtcggtgggtt 30
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 aacattcattgctgtcggtgggtt 75
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggtt 24
