miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41509_ptc-MIR530a:mirbase
          Length = 144

 Score =  285 bits (144), Expect = 5e-78
 Identities = 144/144 (100%)
 Strand = Plus / Minus

                                                                       
Query: 6   accaacatggcattcacctgcacctgcacctgcacctcaagcttgttttaatgtttcaaa 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 accaacatggcattcacctgcacctgcacctgcacctcaagcttgttttaatgtttcaaa 85

                                                                       
Query: 66  cttacttttggttttggagtcaaaaacaaaagaaagaaacaagtaaggtgcaggtgcaaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84  cttacttttggttttggagtcaaaaacaaaagaaagaaacaagtaaggtgcaggtgcaaa 25

                                   
Query: 126 tgcagataaaggcaacatgttggc 149
           ||||||||||||||||||||||||
Sbjct: 24  tgcagataaaggcaacatgttggc 1




>41510_ptc-MIR530b:mirbase
          Length = 172

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 114 tgcaggtgcaaatgcagataaaggcaacatgttggc 149
           |||||||||||||||||||||||||||||| |||||
Sbjct: 36  tgcaggtgcaaatgcagataaaggcaacatattggc 1



 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 6   accaacatggcattcacctgcacctgcacctgcacctcaa 45
           ||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 172 accaaaatggcattcacctgcacttgcacctgcacctcaa 133




>41158_tcc-MIR530b:mirbase
          Length = 178

 Score = 60.0 bits (30), Expect = 5e-10
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 110 aaggtgcaggtgcaaatgcagataaaggcaacat 143
           ||||||||||||||||||||||||||||| ||||
Sbjct: 40  aaggtgcaggtgcaaatgcagataaaggctacat 7



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 7   ccaacatggcattcacctgcacctgcacctgcacctc 43
           |||| |||||||||||||||| |||| ||||||||||
Sbjct: 173 ccaaaatggcattcacctgcagctgcccctgcacctc 137




>41157_tcc-MIR530a:mirbase
          Length = 163

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 111 aggtgcaggtgcaaatgcagataaa 135
           |||||||||||||||||||||||||
Sbjct: 39  aggtgcaggtgcaaatgcagataaa 15




>41263_csi-MIR530b:mirbase
          Length = 154

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 114 tgcaggtgcaaatgcagataaagg 137
           ||||||||||||||||||||||||
Sbjct: 26  tgcaggtgcaaatgcagataaagg 3




>41262_csi-MIR530a:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 110 aaggtgcaggtgcaaatgcaga 131
           ||||||||||||||||||||||
Sbjct: 35  aaggtgcaggtgcaaatgcaga 14




>42106_osa-MIR530:mirbase
          Length = 157

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 aggtgcaggtgcaaatgcag 130
           ||||||||||||||||||||
Sbjct: 29  aggtgcaggtgcaaatgcag 10




>42105_osa-MIR530:mirbase
          Length = 157

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 aggtgcaggtgcaaatgcag 130
           ||||||||||||||||||||
Sbjct: 29  aggtgcaggtgcaaatgcag 10