miRNEST 2.0, an integrative microRNA resource :: BLAST
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 7 tatatgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgt 66
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 7 tatatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgt 66
Query: 67 ggatggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||||||
Sbjct: 67 ggatggcgtatgaggagccatgcatat 93
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 70
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgtggat 70
Query: 71 ggcgtatgaggagccatgcatattc 95
|||||||||||||||||||||||||
Sbjct: 71 ggcgtatgaggagccatgcatattc 95
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 145 bits (73), Expect = 7e-36
Identities = 82/85 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 70
|||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaacggatcctcgatggcctccgtggat 70
Query: 71 ggcgtatgaggagccatgcatattc 95
|||||||||||||||||||||||||
Sbjct: 71 ggcgtatgaggagccatgcatattc 95
>41219_csi-MIR160:mirbase
Length = 143
Score = 131 bits (66), Expect = 1e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 70
|||||||||||||||||||||||||||||| | | || | ||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgccatttgcagagtcaatcgaaacatcgatggcctccgtggat 92
Query: 71 ggcgtatgaggagccatgcatattcc 96
||||||||||||||||||||||||||
Sbjct: 93 ggcgtatgaggagccatgcatattcc 118
>40019_ath-MIR160a:mirbase
Length = 85
Score = 113 bits (57), Expect = 2e-26
Identities = 79/85 (92%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtgg 68
|||||||||||||||||||||||| ||| ||||||| || || ||||||| |||||||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcg-agtatcgatgacctccgtgg 60
Query: 69 atggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||||
Sbjct: 61 atggcgtatgaggagccatgcatat 85
>39807_aly-MIR160a:mirbase
Length = 158
Score = 105 bits (53), Expect = 6e-24
Identities = 78/85 (91%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtgg 68
|||||||||||||||||||||||| ||| |||| || || || ||||||| |||||||||
Sbjct: 40 tatgcctggctccctgtatgccatatgctgagctcatcg-agtatcgatgacctccgtgg 98
Query: 69 atggcgtatgaggagccatgcatat 93
|||||||||||||||||||||||||
Sbjct: 99 atggcgtatgaggagccatgcatat 123
>40436_gma-MIR160:mirbase
Length = 119
Score = 99.6 bits (50), Expect = 4e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 5 tgtatatgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctcc 64
||||| ||||||||||||||||||||||||| ||||| || || |||||| ||| |||
Sbjct: 15 tgtatgtgcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgaccttt 74
Query: 65 gtggatggcgtatgaggagccatgcatatt 94
|||||||||||||||||||||| |||||||
Sbjct: 75 gtggatggcgtatgaggagccaagcatatt 104
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 75.8 bits (38), Expect = 5e-15
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtgga 69
|||||||||||||||||||||||||||| || ||||| ||| || | | |||| || |||
Sbjct: 10 atgcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcgga 69
Query: 70 tggcgtatgaggagccatgcat 91
|||||| ||||||||||||||
Sbjct: 70 tggcgtgcgaggagccatgcat 91
>41529_sly-MIR160a:mirbase
Length = 129
Score = 69.9 bits (35), Expect = 3e-13
Identities = 81/94 (86%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 6 gtatatgcctggctccctgtatgccatttgcagagcccaccgga--gcatcgat-ggcct 62
|||||||||||||||||||||||||||||||| ||| ||||| | |||||| |||||
Sbjct: 15 gtatatgcctggctccctgtatgccatttgcaaagctcaccgtaatatatcgatgggcct 74
Query: 63 ccgtggatggcgtatgaggagccatgcatattcc 96
|| |||||||||||||||||| |||||||||
Sbjct: 75 tgttgaatggcgtatgaggagccaagcatattcc 108
>40312_bra-MIR160a:mirbase
Length = 127
Score = 67.9 bits (34), Expect = 1e-12
Identities = 74/86 (86%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtgg 68
|||||||||||||||||||||||| | ||| || || | ||| |||| ||||||||
Sbjct: 24 tatgcctggctccctgtatgccatcctctaagctcatcg-accattgatgacctccgtga 82
Query: 69 atggcgtatgaggagccatgcatatt 94
||||||||||||||||||||||||||
Sbjct: 83 atggcgtatgaggagccatgcatatt 108
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgccatttgcagagccca 44
||||||||||||||||||||||||||||| ||||||
Sbjct: 19 tatgcctggctccctgtatgccatttgcaaagccca 54
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 65 gtggatggcgtatgaggagccatgcatattcc 96
|||||||||||||||||||||| |||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattcc 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 gtatatgcctggctccctgtatgccat 32
|||| ||||||||||||||||||||||
Sbjct: 1 gtatgtgcctggctccctgtatgccat 27
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 65 gtggatggcgtatgaggagccatgcatattcc 96
|||||||||||||||||||||| |||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattcc 91
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 6 gtatatgcctggctccctgtatgccat 32
|||| ||||||||||||||||||||||
Sbjct: 1 gtatgtgcctggctccctgtatgccat 27
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgc 36
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 55 gatggcctccgtggatggcgtatgaggagccatgcata 92
|||||||| ||||||||||| |||||||||||||||
Sbjct: 45 gatggcctttgtggatggcgtgcgaggagccatgcata 82
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagag 40
||||||||||||||||||||||||| ||||
Sbjct: 6 tgcctggctccctgtatgccatttgtagag 35
>40658_mtr-MIR160:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagag 40
||||||||||||||||||||||||| ||||
Sbjct: 21 tgcctggctccctgtatgccatttgtagag 50
>41312_ptc-MIR160h:mirbase
Length = 98
Score = 50.1 bits (25), Expect = 3e-07
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 70
|||||||||||||| |||||||||||| ||| || | || | ||| |||||| ||||||
Sbjct: 11 tgcctggctccctgcatgccatttgcatagctcatcagaacgtcggtggccttggtggat 70
Query: 71 ggcgt 75
|||||
Sbjct: 71 ggcgt 75
>40339_rco-MIR160a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttg 35
|||||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccatttg 30
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcca 31
||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52
>42706_zma-MIR160f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcc 30
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>41927_osa-MIR160e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 atatgcctggctccctgtatgcc 30
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 9 tatgcctggctccctgtatgcca 31
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 atgcctggctccctgtatgcca 31
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccat 32
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccatttgc 36
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgccat 32
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 11 tgcctggctccctgtatgcca 31
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
