miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>42787_zma-MIR393b:mirbase
          Length = 108

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tccaaagggatcgcattgatccatc 40
          |||||||||||||||||||||||||
Sbjct: 2  tccaaagggatcgcattgatccatc 26



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 16  tccaaagggatcgcattgatccatc 40
           |||||| ||||||||||||||||||
Sbjct: 105 tccaaaaggatcgcattgatccatc 81




>42566_sbi-MIR393:mirbase
          Length = 139

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 10 gaagcttccaaagggatcgcattgatcc 37
          ||||| ||||||||||||||||||||||
Sbjct: 14 gaagcatccaaagggatcgcattgatcc 41




>41997_osa-MIR393:mirbase
          Length = 115

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 10 gaagcttccaaagggatcgcattgatcc 37
          ||||| ||||||||||||||||||||||
Sbjct: 5  gaagcatccaaagggatcgcattgatcc 32




>41774_bdi-MIR393a:mirbase
          Length = 159

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 10 gaagcttccaaagggatcgcattgatcc 37
          ||||| ||||||||||||||||||||||
Sbjct: 30 gaagcatccaaagggatcgcattgatcc 57




>41641_vvi-MIR393a:mirbase
          Length = 126

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ttccaaagggatcgcattgatcc 37
          |||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatcc 32




>39866_aly-MIR393b:mirbase
          Length = 169

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 11 aagcttccaaagggatcgcattgatcc 37
          |||| ||||||||||||||||||||||
Sbjct: 13 aagcatccaaagggatcgcattgatcc 39




>41642_vvi-MIR393b:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>41420_ptc-MIR393d:mirbase
          Length = 107

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ttccaaagggatcgcattgatc 36
          ||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatc 31




>41419_ptc-MIR393c:mirbase
          Length = 107

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ttccaaagggatcgcattgatc 36
          ||||||||||||||||||||||
Sbjct: 10 ttccaaagggatcgcattgatc 31




>41418_ptc-MIR393b:mirbase
          Length = 84

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>41417_ptc-MIR393a:mirbase
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>41238_csi-MIR393:mirbase
          Length = 145

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcc 42




>41132_tcc-MIR393a:mirbase
          Length = 118

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcc 42




>40707_mtr-MIR393b:mirbase
          Length = 119

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 6  tccaaagggatcgcattgatcc 27




>40706_mtr-MIR393:mirbase
          Length = 135

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcc 42




>40470_gma-MIR393:mirbase
          Length = 120

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>40373_rco-MIR393:mirbase
          Length = 108

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 15 ttccaaagggatcgcattgatc 36
          ||||||||||||||||||||||
Sbjct: 5  ttccaaagggatcgcattgatc 26




>40295_bna-MIR393:mirbase
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 1  tccaaagggatcgcattgatcc 22



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 75  ggatcatgcgatctcttcgga 95
           |||||||||||||||||||||
Sbjct: 107 ggatcatgcgatctcttcgga 127




>40076_ath-MIR393b:mirbase
          Length = 160

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>40075_ath-MIR393a:mirbase
          Length = 133

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32




>39865_aly-MIR393a:mirbase
          Length = 147

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 16 tccaaagggatcgcattgatcc 37
          ||||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatcc 39




>42788_zma-MIR393c:mirbase
          Length = 97

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 2  tccaaagggatcgcattgatc 22




>42786_zma-MIR393a:mirbase
          Length = 126

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41




>42567_sbi-MIR393b:mirbase
          Length = 84

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 1  tccaaagggatcgcattgatc 21




>41999_osa-MIR393b:mirbase
          Length = 132

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47




>41998_osa-MIR393b:mirbase
          Length = 132

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47




>41775_bdi-MIR393b:mirbase
          Length = 174

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62




>41133_tcc-MIR393b:mirbase
          Length = 158

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41




>41054_ghr-MIR393:mirbase
          Length = 139

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 16 tccaaagggatcgcattgatc 36
          |||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 73  ttggatcatgcgatctcttcggaa 96
           ||||||||||||||| ||||||||
Sbjct: 107 ttggatcatgcgatcccttcggaa 130