miRNEST 2.0, an integrative microRNA resource :: BLAST
>34354_dre-mir-199-3:mirbase
Length = 98
Score = 127 bits (64), Expect = 1e-30
Identities = 76/80 (95%)
Strand = Plus / Plus
Query: 1 ccccccgcctgcccagtgttcagactacctgttcatcaggctacagctgaacagtagtct 60
|||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 cccctcgcctgcccagtgttcagactacctgttcatcatgctgcagctgaacagtagtcc 64
Query: 61 gcacattggttaggctgggc 80
||||||||||||||||||||
Sbjct: 65 gcacattggttaggctgggc 84
>34627_fru-mir-199-3:mirbase
Length = 99
Score = 121 bits (61), Expect = 8e-29
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 7 gcctgcccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacat 66
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 12 gcctgcccagtgttcagactacctgttcatcagactaaagctgaacagtagtctgcacat 71
Query: 67 tggttaggctggg 79
|||||| ||||||
Sbjct: 72 tggttaagctggg 84
>34774_tni-mir-199-3:mirbase
Length = 95
Score = 107 bits (54), Expect = 1e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 7 gcctgcccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacat 66
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 10 gcctgcccagtgttcagactacctgttcatcagactcaagctgaacagtagtctgcacat 69
Query: 67 tggtta 72
||||||
Sbjct: 70 tggtta 75
>25517_pma-mir-199a:mirbase
Length = 79
Score = 67.9 bits (34), Expect = 1e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| ||| || | || |||||||||||||||||||||
Sbjct: 11 cccagtgttcagactacctgttcaggaggttaatgttgtacagtagtctgcacattggtt 70
Query: 72 ag 73
||
Sbjct: 71 ag 72
>34626_fru-mir-199-2:mirbase
Length = 73
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 5 ccgcctgcccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcac 64
||||||||||||||||||||||||||||||| | | | || ||||||||||||||
Sbjct: 1 ccgcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcac 60
Query: 65 attggttaggctg 77
|||||||||||||
Sbjct: 61 attggttaggctg 73
>34772_tni-mir-199-1:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 4e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
||||||||||||||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 14 cccagtgttcagactacctgttcattgtcatactggtgtacagtagtctgcacattggtt 73
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 74 agactgggc 82
>34773_tni-mir-199-2:mirbase
Length = 73
Score = 65.9 bits (33), Expect = 4e-12
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 5 ccgcctgcccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcac 64
||||||||||||||||||||||||||||||| | | | || ||||||||||||||
Sbjct: 1 ccgcctgcccagtgttcagactacctgttcaggaagtagtggttgtacagtagtctgcac 60
Query: 65 attggttaggctg 77
|||||||||||||
Sbjct: 61 attggttaggctg 73
>34353_dre-mir-199-2:mirbase
Length = 96
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 4 cccgcctgcccagtgttcagactacctgttca 35
||||||||||||||||||||||||||||||||
Sbjct: 22 cccgcctgcccagtgttcagactacctgttca 53
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgg 78
||||||||||||||||||||||||||||
Sbjct: 69 acagtagtctgcacattggttaggctgg 96
>27417_mdo-mir-199b:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 54 acagtagtctgcacattggttaggctgggc 83
>27796_mml-mir-199a-2:mirbase
Length = 71
Score = 60.0 bits (30), Expect = 2e-10
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggcta-cagc-tgaacagtagtctgcacattgg 69
|||||||||||||||||||||||| ||||| || | || |||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
Query: 70 ttaggc 75
||||||
Sbjct: 66 ttaggc 71
>27797_mml-mir-199a-2:mirbase
Length = 71
Score = 60.0 bits (30), Expect = 2e-10
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggcta-cagc-tgaacagtagtctgcacattgg 69
|||||||||||||||||||||||| ||||| || | || |||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaacgtgtacagtagtctgcacattgg 65
Query: 70 ttaggc 75
||||||
Sbjct: 66 ttaggc 71
>28516_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>28517_hsa-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>30278_ptr-mir-199b:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>31918_mmu-mir-199a-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 2e-10
Identities = 59/67 (88%), Gaps = 5/67 (7%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggct---acagctgaacagtagtctgcacattg 68
|||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggaca--tgtacagtagtctgcacattg 63
Query: 69 gttaggc 75
|||||||
Sbjct: 64 gttaggc 70
>31919_mmu-mir-199a-1:mirbase
Length = 70
Score = 60.0 bits (30), Expect = 2e-10
Identities = 59/67 (88%), Gaps = 5/67 (7%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggct---acagctgaacagtagtctgcacattg 68
|||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctgggaca--tgtacagtagtctgcacattg 63
Query: 69 gttaggc 75
|||||||
Sbjct: 64 gttaggc 70
>31922_mmu-mir-199b:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 65 acagtagtctgcacattggttaggctgggc 94
>33276_bta-mir-199b:mirbase
Length = 100
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 55 acagtagtctgcacattggttaggctgggc 84
>34030_ssc-mir-199a-2:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 51 acagtagtctgcacattggttaggctgggc 80
>34031_ssc-mir-199a-2:mirbase
Length = 80
Score = 60.0 bits (30), Expect = 2e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
||||||||||||||||||||||||||||||
Sbjct: 51 acagtagtctgcacattggttaggctgggc 80
>34352_dre-mir-199-1:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 2e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | ||| | || |||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggatcatactggtgtacagtagtctgcacattggtt 74
Query: 72 ag 73
||
Sbjct: 75 ag 76
>34625_fru-mir-199-1:mirbase
Length = 87
Score = 60.0 bits (30), Expect = 2e-10
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | ||| | || |||||||||||||||||||||
Sbjct: 15 cccagtgttcagactacctgttcaggattttactggtgtacagtagtctgcacattggtt 74
Query: 72 ag 73
||
Sbjct: 75 ag 76
>25818_xtr-mir-199a:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 19 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 78
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 79 agactgggc 87
>25989_gga-mir-199-2:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 29 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 88
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 89 agactgggc 97
>26496_tgu-mir-199-2:mirbase
Length = 128
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 86 agactgggc 94
>26497_tgu-mir-199-2:mirbase
Length = 128
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 26 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 85
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 86 agactgggc 94
>27582_lla-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>27623_sla-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>27795_mml-mir-199a-1:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>28231_mne-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>28326_ggo-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>28514_hsa-mir-199a-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>28515_hsa-mir-199a-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>30115_ppa-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>30277_ptr-mir-199a-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>30892_ppy-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>30893_ppy-mir-199a-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>30894_ppy-mir-199a-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>31527_oan-mir-199:mirbase
Length = 118
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgctgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>31920_mmu-mir-199a-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>31921_mmu-mir-199a-2:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>32786_rno-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>32787_rno-mir-199a:mirbase
Length = 110
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>33272_bta-mir-199a-1:mirbase
Length = 104
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>33273_bta-mir-199a-1:mirbase
Length = 104
Score = 58.0 bits (29), Expect = 1e-09
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 31 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 90
Query: 72 aggctgggc 80
|| ||||||
Sbjct: 91 agactgggc 99
>33793_bta-mir-3604-1:mirbase
Length = 78
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 51 acagtagtctgcacattggttaggctggg 79
|||||||||||||||||||||||||||||
Sbjct: 29 acagtagtctgcacattggttaggctggg 1
>25988_gga-mir-199-1:mirbase
Length = 94
Score = 56.0 bits (28), Expect = 4e-09
Identities = 63/71 (88%), Gaps = 4/71 (5%)
Strand = Plus / Plus
Query: 9 ctgcccagtgttcagactacctgttcatcaggctac-ag-ctgaacagtagtctgcacat 66
||||||||||||||||||||||||||| | |||| || || ||||||||||||||||
Sbjct: 12 ctgcccagtgttcagactacctgttca--ggactacgagattgtacagtagtctgcacat 69
Query: 67 tggttaggctg 77
|||||||||||
Sbjct: 70 tggttaggctg 80
>34029_ssc-mir-199a-1:mirbase
Length = 76
Score = 56.0 bits (28), Expect = 4e-09
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctacagctgaacagtagtctgcacattggtt 71
|||||||||||||||||||||||| | | | | || |||||||||||||||||||||
Sbjct: 9 cccagtgttcagactacctgttcaggacaatgccgttgtacagtagtctgcacattggtt 68
Query: 72 aggctggg 79
|| |||||
Sbjct: 69 agactggg 76
>34032_ssc-mir-199b:mirbase
Length = 74
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgg 78
||||||||||||||||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggctgg 74
>26494_tgu-mir-199-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctg 77
|||||||||||||||||||||||||||
Sbjct: 41 acagtagtctgcacattggttaggctg 67
>26495_tgu-mir-199-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctg 77
|||||||||||||||||||||||||||
Sbjct: 41 acagtagtctgcacattggttaggctg 67
>28512_hsa-mir-199a-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctac--agctgaacagtagtctgcacattgg 69
|||||||||||||||||||||||| ||||| | || |||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 70 ttaggc 75
||||||
Sbjct: 66 ttaggc 71
>28513_hsa-mir-199a-1:mirbase
Length = 71
Score = 54.0 bits (27), Expect = 2e-08
Identities = 57/66 (86%), Gaps = 2/66 (3%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcaggctac--agctgaacagtagtctgcacattgg 69
|||||||||||||||||||||||| ||||| | || |||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 70 ttaggc 75
||||||
Sbjct: 66 ttaggc 71
>33794_bta-mir-3604-2:mirbase
Length = 73
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 51 acagtagtctgcacattggttaggctg 77
|||||||||||||||||||||||||||
Sbjct: 27 acagtagtctgcacattggttaggctg 1
>30276_ptr-mir-199a-1:mirbase
Length = 70
Score = 52.0 bits (26), Expect = 6e-08
Identities = 56/65 (86%), Gaps = 2/65 (3%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttcatcagg--ctacagctgaacagtagtctgcacattgg 69
|||||||||||||||||||||||| ||| || | || |||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttcaggaggctctcaatgtgtacagtagtctgcacattgg 65
Query: 70 ttagg 74
|||||
Sbjct: 66 ttagg 70
>30895_ppy-mir-199b:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
|||||| |||||||||||||||||||||||
Sbjct: 66 acagtattctgcacattggttaggctgggc 95
>30896_ppy-mir-199b:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctgggc 80
|||||| |||||||||||||||||||||||
Sbjct: 66 acagtattctgcacattggttaggctgggc 95
>25518_pma-mir-199b:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggctggg 79
||||||||||||||||||||||| |||||
Sbjct: 51 acagtagtctgcacattggttagactggg 79
>27085_eca-mir-199b:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggc 75
|||||||||||||||||||||||||
Sbjct: 45 acagtagtctgcacattggttaggc 69
>27086_eca-mir-199b:mirbase
Length = 69
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggc 75
|||||||||||||||||||||||||
Sbjct: 45 acagtagtctgcacattggttaggc 69
>33274_bta-mir-199a-2:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggc 75
|||||||||||||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggc 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttca 35
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
>33275_bta-mir-199a-2:mirbase
Length = 71
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggttaggc 75
|||||||||||||||||||||||||
Sbjct: 47 acagtagtctgcacattggttaggc 71
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttca 35
||||||||||||||||||||||||
Sbjct: 6 cccagtgttcagactacctgttca 29
>27083_eca-mir-199a:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttca 35
||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttca 24
>27084_eca-mir-199a:mirbase
Length = 61
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttca 35
||||||||||||||||||||||||
Sbjct: 1 cccagtgttcagactacctgttca 24
>26756_cfa-mir-199-1:mirbase
Length = 61
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 ccagtgttcagactacctgttca 35
|||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttca 23
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggtt 71
|||||||||||||||||||||
Sbjct: 41 acagtagtctgcacattggtt 61
>26757_cfa-mir-199-2:mirbase
Length = 59
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 ccagtgttcagactacctgttca 35
|||||||||||||||||||||||
Sbjct: 1 ccagtgttcagactacctgttca 23
>26758_cfa-mir-199-3:mirbase
Length = 59
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattggtt 71
|||||||||||||||||||||
Sbjct: 39 acagtagtctgcacattggtt 59
>24847_cin-mir-199:mirbase
Length = 102
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattgg 69
|||||||||||||||||||
Sbjct: 66 acagtagtctgcacattgg 84
>25819_xtr-mir-199b:mirbase
Length = 110
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 12 cccagtgttcagactacctgttc 34
||||||||||||||||| |||||
Sbjct: 31 cccagtgttcagactacgtgttc 53
>33277_bta-mir-199c:mirbase
Length = 76
Score = 38.2 bits (19), Expect = 9e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 51 acagtagtctgcacattgg 69
|||||||||||||||||||
Sbjct: 47 acagtagtctgcacattgg 65
