miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>34604_fru-mir-142b:mirbase
          Length = 86

 Score =  125 bits (63), Expect = 7e-30
 Identities = 75/79 (94%)
 Strand = Plus / Plus

                                                                      
Query: 10 acagtgttgtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtt 69
          |||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||
Sbjct: 1  acagtgctgtcacccataaagtagaaagcactactaaactattctacacagtgtagtgtt 60

                             
Query: 70 tcctactttatggatgagt 88
          |||||||||||||||||||
Sbjct: 61 tcctactttatggatgagt 79




>34751_tni-mir-142b:mirbase
          Length = 86

 Score =  125 bits (63), Expect = 7e-30
 Identities = 75/79 (94%)
 Strand = Plus / Plus

                                                                      
Query: 10 acagtgttgtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtt 69
          |||||| |||||||||||||||||||||||||||||||| ||  ||||||||||||||||
Sbjct: 1  acagtgctgtcacccataaagtagaaagcactactaaacgtctttacacagtgtagtgtt 60

                             
Query: 70 tcctactttatggatgagt 88
          |||||||||||||||||||
Sbjct: 61 tcctactttatggatgagt 79




>34313_dre-mir-142b:mirbase
          Length = 86

 Score =  123 bits (62), Expect = 3e-29
 Identities = 74/78 (94%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 9  gtcactcataaagtagacagcactactaaacttctctacacagtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>25962_gga-mir-142:mirbase
          Length = 88

 Score =  107 bits (54), Expect = 2e-24
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          |||||||||||||||||||||||||||||||  |||| ||  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaaacagcactgcagggtgtagtgtttcctactt 69

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 70 tatggatgagtgtactgt 87




>25963_gga-mir-142:mirbase
          Length = 88

 Score =  107 bits (54), Expect = 2e-24
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          |||||||||||||||||||||||||||||||  |||| ||  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaaacagcactgcagggtgtagtgtttcctactt 69

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 70 tatggatgagtgtactgt 87




>34311_dre-mir-142a:mirbase
          Length = 91

 Score =  107 bits (54), Expect = 2e-24
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                      
Query: 8  gtacagtgttgtcacccataaagtagaaagcactactaaacttcactacacagtgtagtg 67
          ||||||||  |||| ||||||||||||||||||||||||||  | |  ||||||||||||
Sbjct: 2  gtacagtgcagtcatccataaagtagaaagcactactaaacccctcgccacagtgtagtg 61

                                        
Query: 68 tttcctactttatggatgagtatactgttg 97
          ||||||||||||||||||||| ||||||||
Sbjct: 62 tttcctactttatggatgagtgtactgttg 91




>34312_dre-mir-142a:mirbase
          Length = 91

 Score =  107 bits (54), Expect = 2e-24
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                      
Query: 8  gtacagtgttgtcacccataaagtagaaagcactactaaacttcactacacagtgtagtg 67
          ||||||||  |||| ||||||||||||||||||||||||||  | |  ||||||||||||
Sbjct: 2  gtacagtgcagtcatccataaagtagaaagcactactaaacccctcgccacagtgtagtg 61

                                        
Query: 68 tttcctactttatggatgagtatactgttg 97
          ||||||||||||||||||||| ||||||||
Sbjct: 62 tttcctactttatggatgagtgtactgttg 91




>34750_tni-mir-142a:mirbase
          Length = 90

 Score =  107 bits (54), Expect = 2e-24
 Identities = 81/90 (90%)
 Strand = Plus / Plus

                                                                      
Query: 8  gtacagtgttgtcacccataaagtagaaagcactactaaacttcactacacagtgtagtg 67
          ||||||||  |||| |||||||||||||||||||||||||||   |  ||||||||||||
Sbjct: 1  gtacagtgcagtcatccataaagtagaaagcactactaaactcttcgccacagtgtagtg 60

                                        
Query: 68 tttcctactttatggatgagtatactgttg 97
          ||||||||||||||||||||| ||||||||
Sbjct: 61 tttcctactttatggatgagtgtactgttg 90




>26473_tgu-mir-142:mirbase
          Length = 71

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 62/67 (92%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          |||||||||||||||||||||||||||||||  |||| ||  ||||||||||||||||||
Sbjct: 5  gtcacccataaagtagaaagcactactaaacagcactgcagggtgtagtgtttcctactt 64

                 
Query: 78 tatggat 84
          |||||||
Sbjct: 65 tatggat 71




>34603_fru-mir-142a:mirbase
          Length = 86

 Score = 91.7 bits (46), Expect = 9e-20
 Identities = 70/78 (89%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          |||| |||||||||||||||||||||||||||      ||||||||||||||||||||||
Sbjct: 9  gtcatccataaagtagaaagcactactaaactctttgccacagtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>27746_mml-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>27747_mml-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>28461_hsa-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>28462_hsa-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>30234_ptr-mir-142:mirbase
          Length = 86

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>30845_ppy-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>30846_ppy-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>32747_rno-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>32748_rno-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>33228_bta-mir-142:mirbase
          Length = 87

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 70/78 (89%), Gaps = 1/78 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 10 gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 68

                            
Query: 78 tatggatgagtatactgt 95
          ||||||||||| ||||||
Sbjct: 69 tatggatgagtgtactgt 86




>33991_ssc-mir-142:mirbase
          Length = 80

 Score = 79.8 bits (40), Expect = 4e-16
 Identities = 68/76 (89%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 6  gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 64

                          
Query: 78 tatggatgagtatact 93
          ||||||||||| ||||
Sbjct: 65 tatggatgagtgtact 80




>33992_ssc-mir-142:mirbase
          Length = 80

 Score = 79.8 bits (40), Expect = 4e-16
 Identities = 68/76 (89%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||
Sbjct: 6  gtcacccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactt 64

                          
Query: 78 tatggatgagtatact 93
          ||||||||||| ||||
Sbjct: 65 tatggatgagtgtact 80




>25666_xla-mir-142:mirbase
          Length = 86

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                      
Query: 20 cacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctacttta 79
          |||||||||||||||||||||||||| ||   |||  ||  |||||||||||||||||||
Sbjct: 10 cacccataaagtagaaagcactactagacaggactgaacgctgtagtgtttcctacttta 69

                         
Query: 80 tggatgagtatactg 94
          ||||||||| |||||
Sbjct: 70 tggatgagtgtactg 84




>25788_xtr-mir-142-1:mirbase
          Length = 86

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                      
Query: 20 cacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctacttta 79
          |||||||||||||||||||||||||| ||   |||  ||  |||||||||||||||||||
Sbjct: 10 cacccataaagtagaaagcactactagacaggactgaacgctgtagtgtttcctacttta 69

                         
Query: 80 tggatgagtatactg 94
          ||||||||| |||||
Sbjct: 70 tggatgagtgtactg 84




>25789_xtr-mir-142-1:mirbase
          Length = 86

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                      
Query: 20 cacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctacttta 79
          |||||||||||||||||||||||||| ||   |||  ||  |||||||||||||||||||
Sbjct: 10 cacccataaagtagaaagcactactagacaggactgaacgctgtagtgtttcctacttta 69

                         
Query: 80 tggatgagtatactg 94
          ||||||||| |||||
Sbjct: 70 tggatgagtgtactg 84




>25790_xtr-mir-142-2:mirbase
          Length = 86

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                      
Query: 20 cacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctacttta 79
          |||||||||||||||||||||||||| ||   |||  ||  |||||||||||||||||||
Sbjct: 10 cacccataaagtagaaagcactactagacaggactgaacgctgtagtgtttcctacttta 69

                         
Query: 80 tggatgagtatactg 94
          ||||||||| |||||
Sbjct: 70 tggatgagtgtactg 84




>25791_xtr-mir-142-2:mirbase
          Length = 86

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                      
Query: 20 cacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctacttta 79
          |||||||||||||||||||||||||| ||   |||  ||  |||||||||||||||||||
Sbjct: 10 cacccataaagtagaaagcactactagacaggactgaacgctgtagtgtttcctacttta 69

                         
Query: 80 tggatgagtatactg 94
          ||||||||| |||||
Sbjct: 70 tggatgagtgtactg 84




>27390_mdo-mir-142:mirbase
          Length = 74

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 63/71 (88%), Gaps = 1/71 (1%)
 Strand = Plus / Plus

                                                                      
Query: 18 gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
          ||||||||||||||||||||||||||| |||  || |  |  ||||||||||||||||||
Sbjct: 4  gtcacccataaagtagaaagcactact-aacagcaatgtagggtgtagtgtttcctactt 62

                     
Query: 78 tatggatgagt 88
          |||||||||||
Sbjct: 63 tatggatgagt 73




>31499_oan-mir-142:mirbase
          Length = 110

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 72/83 (86%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                       
Query: 18  gtcacccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactt 77
           |||| |||||||||||||||||||||||| |  | ||  |  ||||||||||||||||||
Sbjct: 23  gtcatccataaagtagaaagcactactaa-cagcgctgtagggtgtagtgtttcctactt 81

                                  
Query: 78  tatggatgagtatactgttggct 100
           ||||||||||| |||||| ||||
Sbjct: 82  tatggatgagtgtactgtgggct 104




>27041_eca-mir-142:mirbase
          Length = 64

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                      
Query: 21 acccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactttat 80
          |||||||||||||||||||||||| |||  ||||  |  |||||||||||||||||||||
Sbjct: 1  acccataaagtagaaagcactact-aacagcactggagggtgtagtgtttcctactttat 59

               
Query: 81 ggatg 85
          |||||
Sbjct: 60 ggatg 64




>27042_eca-mir-142:mirbase
          Length = 64

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                      
Query: 21 acccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactttat 80
          |||||||||||||||||||||||| |||  ||||  |  |||||||||||||||||||||
Sbjct: 1  acccataaagtagaaagcactact-aacagcactggagggtgtagtgtttcctactttat 59

               
Query: 81 ggatg 85
          |||||
Sbjct: 60 ggatg 64




>31874_mmu-mir-142:mirbase
          Length = 64

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                      
Query: 21 acccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactttat 80
          |||||||||||||||||||||||| |||  ||||  |  |||||||||||||||||||||
Sbjct: 1  acccataaagtagaaagcactact-aacagcactggagggtgtagtgtttcctactttat 59

               
Query: 81 ggatg 85
          |||||
Sbjct: 60 ggatg 64




>31875_mmu-mir-142:mirbase
          Length = 64

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 58/65 (89%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                      
Query: 21 acccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactttat 80
          |||||||||||||||||||||||| |||  ||||  |  |||||||||||||||||||||
Sbjct: 1  acccataaagtagaaagcactact-aacagcactggagggtgtagtgtttcctactttat 59

               
Query: 81 ggatg 85
          |||||
Sbjct: 60 ggatg 64




>26716_cfa-mir-142:mirbase
          Length = 63

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 57/64 (89%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                      
Query: 22 cccataaagtagaaagcactactaaacttcactacacagtgtagtgtttcctactttatg 81
          ||||||||||||||||||||||||| |  ||||  |  ||||||||||||||||||||||
Sbjct: 1  cccataaagtagaaagcactactaa-cagcactggagggtgtagtgtttcctactttatg 59

              
Query: 82 gatg 85
          ||||
Sbjct: 60 gatg 63