miRNEST 2.0, an integrative microRNA resource :: BLAST
>31478_oan-mir-122:mirbase
Length = 111
Score = 111 bits (56), Expect = 7e-26
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 2 ccagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcaca 61
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 20 ccagagctgtggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcaca 79
Query: 62 ctaaatagctac 73
||||||||||||
Sbjct: 80 ctaaatagctac 91
>25937_gga-mir-122-1:mirbase
Length = 77
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cagagctgtggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacac 60
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 61 taaatagctac 71
>33197_bta-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacac 66
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 67 taaatagctac 77
>33967_ssc-mir-122:mirbase
Length = 85
Score = 109 bits (55), Expect = 3e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacac 66
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 67 taaatagctac 77
>26449_tgu-mir-122:mirbase
Length = 72
Score = 103 bits (52), Expect = 2e-23
Identities = 65/68 (95%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 2 ccagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcaca 61
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 2 ccagagctgtggagtgtgacaatggtgtttgtgtccatc-tatcaaacgccattatcaca 60
Query: 62 ctaaatag 69
||||||||
Sbjct: 61 ctaaatag 68
>25938_gga-mir-122-2:mirbase
Length = 77
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cagagctatggagtgtgacaatggtgtttgtgtccaatctatcaaacgccattatcacac 60
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 61 taaatagctac 71
>27371_mdo-mir-122:mirbase
Length = 74
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 cagagctatggagtgtgacaatggtgtttgtgtccagtctatcaaacgccattatcacac 60
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 61 taaatagctac 71
>27714_mml-mir-122a:mirbase
Length = 85
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 67 taaatagctac 77
>28426_hsa-mir-122:mirbase
Length = 85
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 67 taaatagctac 77
>29379_hsa-mir-3591:mirbase
Length = 73
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 73 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 14
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 13 taaatagctac 3
>29380_hsa-mir-3591:mirbase
Length = 73
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 73 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 14
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 13 taaatagctac 3
>30207_ptr-mir-122:mirbase
Length = 84
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 6 cagagctgtggagtgtgacaatggtgtttgtgtctaaattatcaaacgccattatcacac 65
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 66 taaatagctac 76
>30814_ppy-mir-122:mirbase
Length = 85
Score = 101 bits (51), Expect = 7e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7 cagagctgtggagtgtgacaatggtgtttgtgtctaaactatcaaacgccattatcacac 66
Query: 63 taaatagctac 73
|||||||||||
Sbjct: 67 taaatagctac 77
>27006_eca-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 6 agctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacactaa 65
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaa 60
Query: 66 atagct 71
||||||
Sbjct: 61 atagct 66
>34731_tni-mir-122:mirbase
Length = 66
Score = 99.6 bits (50), Expect = 3e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 6 agctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacactaa 65
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtcctttctttcaaacgccattatcacactaa 60
Query: 66 atagct 71
||||||
Sbjct: 61 atagct 66
>34270_dre-mir-122:mirbase
Length = 76
Score = 93.7 bits (47), Expect = 2e-20
Identities = 66/71 (92%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 1 tccagagctgtggagtgtgacaatggtgtttgtgtcctccgt-atcaaacgccattatca 59
||||||||||||||||||||||||||||||||| || || || ||||||||||||||||
Sbjct: 1 tccagagctgtggagtgtgacaatggtgtttgtatcatctgtcgtcaaacgccattatca 60
Query: 60 cactaaatagc 70
|||||||||||
Sbjct: 61 cactaaatagc 71
>31837_mmu-mir-122:mirbase
Length = 66
Score = 91.7 bits (46), Expect = 6e-20
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 6 agctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacactaa 65
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 agctgtggagtgtgacaatggtgtttgtgtccaaaccatcaaacgccattatcacactaa 60
Query: 66 atagct 71
||||||
Sbjct: 61 atagct 66
>26685_cfa-mir-122:mirbase
Length = 58
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 11 tggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacactaaata 68
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 tggagtgtgacaatggtgtttgtgtccaaactatcaaacgccattatcacactaaata 58
>34584_fru-mir-122:mirbase
Length = 66
Score = 83.8 bits (42), Expect = 2e-17
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 6 agctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacactaa 65
|||| ||||||||||||||||||||||| |||| | ||||||||||||||||||||||
Sbjct: 1 agctatggagtgtgacaatggtgtttgtttcctttctttcaaacgccattatcacactaa 60
Query: 66 atagct 71
||||||
Sbjct: 61 atagct 66
>32716_rno-mir-122:mirbase
Length = 85
Score = 77.8 bits (39), Expect = 1e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 7 cagagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacac 66
Query: 63 taaatagctac 73
|||| ||||||
Sbjct: 67 taaacagctac 77
>33091_rno-mir-3591:mirbase
Length = 109
Score = 77.8 bits (39), Expect = 1e-15
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 3 cagagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacac 62
||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 90 cagagctctggagtgtgacaatggtgtttgtgtccaaaacatcaaacgccatcatcacac 31
Query: 63 taaatagctac 73
|||| ||||||
Sbjct: 30 taaacagctac 20
>25762_xtr-mir-122:mirbase
Length = 69
Score = 73.8 bits (37), Expect = 1e-14
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 5 gagctgtggagtgtgacaatggtgtttgtgtcctccgtatcaaacgccattatcacacta 64
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 gagctatggagtgtgacaatggtgtttgtgtcagagctatcaaacgccattatcacacta 60
Query: 65 a 65
|
Sbjct: 61 a 61
