miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>36101_dan-mir-34:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>36179_der-mir-34:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>36267_dgr-mir-34:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>36373_dme-mir-34:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 15 tttggcagtgtggttagctggttgt 39
>36374_dme-mir-34:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 15 tttggcagtgtggttagctggttgt 39
>36777_dmo-mir-34:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>36850_dpe-mir-34:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>36926_dps-mir-34:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 15 tttggcagtgtggttagctggttgt 39
>37139_dse-mir-34:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>37215_dsi-mir-34:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>37353_dvi-mir-34:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>37430_dwi-mir-34:mirbase
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>37507_dya-mir-34:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tttggcagtgtggttagctggttgt 53
|||||||||||||||||||||||||
Sbjct: 12 tttggcagtgtggttagctggttgt 36
>34870_sko-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggttgtt 54
||||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgtt 45
>35005_dpu-mir-34:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttggcagtgtggttagctggttgt 53
||||||||||||||||||||||||
Sbjct: 21 ttggcagtgtggttagctggttgt 44
>35531_bmo-mir-34:mirbase
Length = 98
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttggcagtgtggttagctggttgt 53
||||||||||||||||||||||||
Sbjct: 20 ttggcagtgtggttagctggttgt 43
>37576_ngi-mir-34:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttggcagtgtggttagctggttgt 53
||||||||||||||||||||||||
Sbjct: 7 ttggcagtgtggttagctggttgt 30
>37608_nlo-mir-34:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttggcagtgtggttagctggttgt 53
||||||||||||||||||||||||
Sbjct: 7 ttggcagtgtggttagctggttgt 30
>37645_nvi-mir-34:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 30 ttggcagtgtggttagctggttgt 53
||||||||||||||||||||||||
Sbjct: 20 ttggcagtgtggttagctggttgt 43
>38739_cte-mir-34:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggttgt 53
|||||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggttgt 44
>35184_aae-mir-34:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggttgt 53
|||||||||||||||||||||||
Sbjct: 16 tggcagtgtggttagctggttgt 38
>35283_aga-mir-34:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggttgt 53
|||||||||||||||||||||||
Sbjct: 17 tggcagtgtggttagctggttgt 39
>37723_tca-mir-34:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggttgt 53
|||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgt 33
>37724_tca-mir-34:mirbase
Length = 79
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggttgt 53
|||||||||||||||||||||||
Sbjct: 11 tggcagtgtggttagctggttgt 33
>38100_bma-mir-34:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggttgt 53
|||||||||||||||||||||||
Sbjct: 23 tggcagtgtggttagctggttgt 45
>38488_crm-mir-34:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ggcagtgtggttagctggttg 52
|||||||||||||||||||||
Sbjct: 16 ggcagtgtggttagctggttg 36
>38127_cbr-mir-34:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ggcagtgtggttagctggttg 52
|||||||||||||||||||||
Sbjct: 19 ggcagtgtggttagctggttg 39
>38268_cel-mir-34:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 32 ggcagtgtggttagctggttg 52
|||||||||||||||||||||
Sbjct: 17 ggcagtgtggttagctggttg 37
>38858_lgi-mir-34:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 31 tggcagtgtggttagctggt 50
||||||||||||||||||||
Sbjct: 22 tggcagtgtggttagctggt 41
>34815_spu-mir-34:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 32 ggcagtgtggttagctggttgttt 55
|||||||| |||||||||||||||
Sbjct: 22 ggcagtgtagttagctggttgttt 45
>35358_ame-mir-34:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 ttggcagtgtggttagctggttgt 53
|||||||||| |||||||||||||
Sbjct: 20 ttggcagtgttgttagctggttgt 43
