miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>31332_ppy-mir-1273:mirbase
          Length = 103

 Score = 65.9 bits (33), Expect = 3e-12
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                   
Query: 1  ttgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
          ||||||||||   |||||| ||||||| ||||||||||||| |||||||||||||||
Sbjct: 38 ttgcagtgagccaagatcacgccactgcactccagcctgggtgacagagcaagactc 94




>29129_hsa-mir-1273g:mirbase
          Length = 100

 Score = 60.0 bits (30), Expect = 2e-10
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                
Query: 2  tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagac 55
          |||||| ||||| |||||| |||||| ||||||||||| | |||||||||||||
Sbjct: 38 tgcagtaagttgtgatcataccactgcactccagcctgagtgacagagcaagac 91




>29124_hsa-mir-1273:mirbase
          Length = 103

 Score = 58.0 bits (29), Expect = 8e-10
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
          ||||||| |||||||||||||||||| ||||||||||
Sbjct: 58 gccactgcactccagcctgggcgacaaagcaagactc 94




>30688_ptr-mir-1273:mirbase
          Length = 102

 Score = 58.0 bits (29), Expect = 8e-10
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                               
Query: 21 gccactgtactccagcctgggcgacagagcaagactc 57
          ||||||| |||||||||||||||||| ||||||||||
Sbjct: 58 gccactgcactccagcctgggcgacaaagcaagactc 94




>29127_hsa-mir-1273e:mirbase
          Length = 102

 Score = 56.0 bits (28), Expect = 3e-09
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                  
Query: 2  tgcagtgagttgagatcatgccactgtactccagcctgggcgacagagcaagactc 57
          |||||||||  ||||||  ||||||||||||||||||||| |||| ||| ||||||
Sbjct: 39 tgcagtgagccgagatcgagccactgtactccagcctgggtgacacagcgagactc 94




>29673_hsa-mir-4472-2:mirbase
          Length = 67

 Score = 56.0 bits (28), Expect = 3e-09
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                  
Query: 29 actccagcctgggcgacagagcaagactcggtctcaaaaa 68
          ||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 67 actccggcctgggcgacggagcaagactctgtctcaaaaa 28




>34143_ssc-mir-1285:mirbase
          Length = 80

 Score = 46.1 bits (23), Expect = 3e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 21 gccactgtactccagcctgggcgacagagcaagac 55
          |||||||||||||||||||||| ||| ||| ||||
Sbjct: 33 gccactgtactccagcctgggcaacatagcgagac 67




>29099_hsa-mir-1254:mirbase
          Length = 97

 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 20 tgccactgtactccagcct 38
          |||||||||||||||||||
Sbjct: 54 tgccactgtactccagcct 72