miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>30688_ptr-mir-1273:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 1e-09
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 acctgggaggtggagcttgcagtgagcccacatggggccactgcctggcagcctgggcga 60
||||||| ||||||| |||||||||||| | || | |||||||| ||||||||||||
Sbjct: 22 acctgggtggtggaggttgcagtgagccaagattgcgccactgcactccagcctgggcga 81
Query: 61 cacagcaagactc 73
|| ||||||||||
Sbjct: 82 caaagcaagactc 94
>29124_hsa-mir-1273:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 2e-07
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 9 ggtggagcttgcagtgagcccacatggggccactgcctggcagcctgggcgacacagcaa 68
||||||| |||||||||||| | || | |||||||| |||||||||||||| |||||
Sbjct: 30 ggtggaggttgcagtgagccaagattgcgccactgcactccagcctgggcgacaaagcaa 89
Query: 69 gactc 73
|||||
Sbjct: 90 gactc 94
>31332_ppy-mir-1273:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 5 gggaggtggagcttgcagtgagcccacatggggccactgcctggcagcctgggcgacaca 64
||||||||||| |||||||||||| | || |||||||| ||||||||| |||| |
Sbjct: 26 gggaggtggaggttgcagtgagccaagatcacgccactgcactccagcctgggtgacaga 85
Query: 65 gcaagactc 73
|||||||||
Sbjct: 86 gcaagactc 94
>29659_hsa-mir-4459:mirbase
Length = 66
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 ggaggtggagcttgcagtgagcc 28
|||||||||| ||||||||||||
Sbjct: 15 ggaggtggaggttgcagtgagcc 37
