miRNEST 2.0, an integrative microRNA resource :: BLAST
>27108_eca-mir-223:mirbase
Length = 104
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 65
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 104
>28337_ggo-mir-223:mirbase
Length = 110
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>28544_hsa-mir-223:mirbase
Length = 110
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>30124_ppa-mir-223:mirbase
Length = 110
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>30301_ptr-mir-223:mirbase
Length = 110
Score = 188 bits (95), Expect = 5e-49
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccatgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>27628_sla-mir-223:mirbase
Length = 110
Score = 172 bits (87), Expect = 3e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccgtgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
||||||||||||||||||||||||||||||| |||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcgacacatgc 103
>27821_mml-mir-223:mirbase
Length = 110
Score = 172 bits (87), Expect = 3e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttggacactccgtgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||| ||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcatatgc 103
>30918_ppy-mir-223:mirbase
Length = 110
Score = 172 bits (87), Expect = 3e-44
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||
Sbjct: 5 gcctcctgcagtgccacgctccgtgtatttgacaagctgagttagacactccgtgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>26784_cfa-mir-223:mirbase
Length = 103
Score = 165 bits (83), Expect = 8e-42
Identities = 95/99 (95%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| |
Sbjct: 5 gcctcctgcagtgccacactccgtgtatttgacaagctgagttagacactccatgtggaa 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 103
>31953_mmu-mir-223:mirbase
Length = 110
Score = 145 bits (73), Expect = 7e-36
Identities = 91/97 (93%)
Strand = Plus / Plus
Query: 6 ctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggtagagtg 65
|||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10 ctgcagtgtcacgctccgtgtatttgacaagctgagttggacactctgtgtggtagagtg 69
Query: 66 tcagtttgtcaaataccccaagtgcggcacatgccta 102
|||||||||||||||||||||||| ||| ||||||||
Sbjct: 70 tcagtttgtcaaataccccaagtgtggctcatgccta 106
>33303_bta-mir-223:mirbase
Length = 108
Score = 141 bits (71), Expect = 1e-34
Identities = 95/102 (93%), Gaps = 2/102 (1%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 5 gcctcctgcagtgccatgctccgtgtatttgacaagctgagttggacactccatgtagt- 63
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgccta 102
|||||||||||||||||||||||||||| |||| |||||||
Sbjct: 64 -agtgtcagtttgtcaaataccccaagtgtggcatatgccta 104
>27436_mdo-mir-223:mirbase
Length = 111
Score = 133 bits (67), Expect = 3e-32
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 4 tcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggtagag 63
|||| ||||||||| ||||| |||||||||||||||||||||||||||| ||| ||||||
Sbjct: 12 tccttcagtgccacactccgtgtatttgacaagctgagttggacactccgtgtcgtagag 71
Query: 64 tgtcagtttgtcaaataccccaagtgcggca 94
|||||||||||||||||||||||||| ||||
Sbjct: 72 tgtcagtttgtcaaataccccaagtgaggca 102
>32819_rno-mir-223:mirbase
Length = 110
Score = 133 bits (67), Expect = 3e-32
Identities = 91/99 (91%)
Strand = Plus / Plus
Query: 1 gcctcctgcagtgccacgctccgggtatttgacaagctgagttggacactccatgtggta 60
|||| |||||||| |||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 5 gccttctgcagtgttacgctccgtgtatttgacaagctgagttggacactctgtgtggta 64
Query: 61 gagtgtcagtttgtcaaataccccaagtgcggcacatgc 99
||||||||||||||||||||||||||||| ||| |||||
Sbjct: 65 gagtgtcagtttgtcaaataccccaagtgtggctcatgc 103
>31544_oan-mir-223:mirbase
Length = 124
Score = 111 bits (56), Expect = 1e-25
Identities = 81/88 (92%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 8 gcagtgccacgctccgggtatttgacaagctgagttggacactccatgtgg-tagagtgt 66
|||||||| ||||||| |||||||||||||||||||||||||||| ||||| | ||||||
Sbjct: 20 gcagtgccgcgctccgtgtatttgacaagctgagttggacactccgtgtggtttgagtgt 79
Query: 67 cagtttgtcaaataccccaagtgcggca 94
||||||||||||||||| ||||| ||||
Sbjct: 80 cagtttgtcaaataccctaagtgaggca 107
>26013_gga-mir-223:mirbase
Length = 100
Score = 93.7 bits (47), Expect = 2e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 25 gtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacccc 84
||||||||||||||||||| ||||||| | ||| |||||||||||||||||||||||||
Sbjct: 20 gtatttgacaagctgagtttgacactcagtctggcagagtgtcagtttgtcaaatacccc 79
Query: 85 aagtgcggcac 95
||||| |||||
Sbjct: 80 aagtgaggcac 90
>25842_xtr-mir-223:mirbase
Length = 86
Score = 85.7 bits (43), Expect = 6e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 25 gtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacccc 84
|||||||||||||||||| ||||||| ||| | |||||||||||||||||||||||||
Sbjct: 16 gtatttgacaagctgagtccgacactcaatgagacagagtgtcagtttgtcaaatacccc 75
Query: 85 aagtgcggcac 95
||||| |||||
Sbjct: 76 aagtgaggcac 86
>25669_xla-mir-223:mirbase
Length = 86
Score = 77.8 bits (39), Expect = 1e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 25 gtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacccc 84
|||||||||||||||||| ||||||| || | |||||||||||||||||||||||||
Sbjct: 16 gtatttgacaagctgagtccgacactcagtgagacagagtgtcagtttgtcaaatacccc 75
Query: 85 aagtgcggcac 95
||||| |||||
Sbjct: 76 aagtgaggcac 86
>26520_tgu-mir-223:mirbase
Length = 71
Score = 75.8 bits (38), Expect = 6e-15
Identities = 63/70 (90%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 25 gtatttgacaagctgagttggacactccatgtggtagagtgtcagtttgtcaaatacccc 84
|||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||
Sbjct: 3 gtatttgacaagctgagtccgacactcagtgtgc-agagtgtcagtttgtcaaatacccc 61
Query: 85 aagtgcggca 94
||||| ||||
Sbjct: 62 aagtgaggca 71
>34647_fru-mir-223:mirbase
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 61 gagtgtcagtttgtcaaataccccaagtg 89
|||||||||||||||||||||||||||||
Sbjct: 45 gagtgtcagtttgtcaaataccccaagtg 73
>34795_tni-mir-223:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 61 gagtgtcagtttgtcaaataccccaagtg 89
|||||||||||||||||||||||||||||
Sbjct: 54 gagtgtcagtttgtcaaataccccaagtg 82
>34384_dre-mir-223:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 63 gtgtcagtttgtcaaataccccaag 87
|||||||||||||||||||||||||
Sbjct: 70 gtgtcagtttgtcaaataccccaag 94
