miRNEST 2.0, an integrative microRNA resource :: BLAST
>34621_fru-mir-194:mirbase
Length = 72
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 17 ctgggtgtaacagcaactccatgtggaagatgcctct--gttccagtggagatgctgtta 74
|||| |||||||||||||||||||||||| || | | ||||||||||| ||||||||
Sbjct: 3 ctggatgtaacagcaactccatgtggaagctgtatgtgagttccagtggaagtgctgtta 62
Query: 75 cctgcagag 83
|||||||||
Sbjct: 63 cctgcagag 71
>34768_tni-mir-194:mirbase
Length = 81
Score = 60.0 bits (30), Expect = 3e-10
Identities = 60/69 (86%), Gaps = 2/69 (2%)
Strand = Plus / Plus
Query: 17 ctgggtgtaacagcaactccatgtggaagatg--cctctgttccagtggagatgctgtta 74
|||| |||||||||||||||||||||||| || | |||||||||||| ||||||||
Sbjct: 6 ctggatgtaacagcaactccatgtggaagctgtatgtgtgttccagtggaagtgctgtta 65
Query: 75 cctgcagag 83
|||||||||
Sbjct: 66 cctgcagag 74
>33266_bta-mir-194-2:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 7e-08
Identities = 49/54 (90%), Gaps = 2/54 (3%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaagatgcctct-gttccagtggagatgctgtta 74
|||||||||||||||||||||||| | ||||| |||||||||| | ||||||||
Sbjct: 15 tgtaacagcaactccatgtggaag-tacctctagttccagtggggctgctgtta 67
>25667_xla-mir-194:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 gggtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||||
Sbjct: 12 gggtgtaacagcaactccatgtgga 36
>31912_mmu-mir-194-1:mirbase
Length = 67
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 gggtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||||
Sbjct: 4 gggtgtaacagcaactccatgtgga 28
>34345_dre-mir-194a:mirbase
Length = 84
Score = 50.1 bits (25), Expect = 3e-07
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaagatgcctctgttccagtggagatgctgttacctgcag 81
|||||||||||||||||||||||| | | | ||||||||||| ||||||| | |||||
Sbjct: 15 tgtaacagcaactccatgtggaaggtttgtgtcttccagtggagctgctgttgcgtgcag 74
Query: 82 a 82
|
Sbjct: 75 a 75
>25514_pma-mir-194:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ggtgtaacagcaactccatgtgga 43
||||||||||||||||||||||||
Sbjct: 15 ggtgtaacagcaactccatgtgga 38
>25814_xtr-mir-194-1:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ggtgtaacagcaactccatgtgga 43
||||||||||||||||||||||||
Sbjct: 13 ggtgtaacagcaactccatgtgga 36
>25815_xtr-mir-194-2:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaag 45
||||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtggaag 38
>27077_eca-mir-194:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaag 45
||||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtggaag 38
>27788_mml-mir-194-2:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaag 45
||||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtggaag 38
>28505_hsa-mir-194-2:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaag 45
||||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtggaag 38
>31524_oan-mir-194-2:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaag 45
||||||||||||||||||||||||
Sbjct: 18 tgtaacagcaactccatgtggaag 41
>31913_mmu-mir-194-2:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaag 45
||||||||||||||||||||||||
Sbjct: 16 tgtaacagcaactccatgtggaag 39
>32781_rno-mir-194-2:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaag 45
||||||||||||||||||||||||
Sbjct: 15 tgtaacagcaactccatgtggaag 38
>27078_eca-mir-194-2:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 49 ttccagtggagatgctgttac 69
>27514_age-mir-194:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 49 ttccagtggagatgctgttac 69
>27787_mml-mir-194-1:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 49 ttccagtggagatgctgttac 69
>28228_mne-mir-194:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 49 ttccagtggagatgctgttac 69
>28321_ggo-mir-194:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 49 ttccagtggagatgctgttac 69
>28504_hsa-mir-194-1:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 49 ttccagtggagatgctgttac 69
>30269_ptr-mir-194:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 49 ttccagtggagatgctgttac 69
>30885_ppy-mir-194:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
>32780_rno-mir-194-1:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 gtgtaacagcaactccatgtgga 43
|||||||||||||||||||||||
Sbjct: 14 gtgtaacagcaactccatgtgga 36
>33265_bta-mir-194-1:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 48/55 (87%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtggaagatgcctc-tgttccagtggagatgctgttac 75
|||||||||||||||||||||| ||| || |||||||||||||||||||||
Sbjct: 21 tgtaacagcaactccatgtggactgtgcgtcaatttccagtggagatgctgttac 75
>34023_ssc-mir-194:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttacct 77
|||||||||||||||||||||||
Sbjct: 45 ttccagtggagatgctgttacct 67
>34024_ssc-mir-194:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttacct 77
|||||||||||||||||||||||
Sbjct: 45 ttccagtggagatgctgttacct 67
>25984_gga-mir-194:mirbase
Length = 75
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtgga 43
||||||||||||||||||||||
Sbjct: 14 tgtaacagcaactccatgtgga 35
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 46 ttccagtggagatgctgttac 66
>26492_tgu-mir-194-1:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtgga 43
||||||||||||||||||||||
Sbjct: 11 tgtaacagcaactccatgtgga 32
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 43 ttccagtggagatgctgttac 63
>26493_tgu-mir-194-2:mirbase
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtgga 43
||||||||||||||||||||||
Sbjct: 11 tgtaacagcaactccatgtgga 32
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 43 ttccagtggagatgctgttac 63
>26750_cfa-mir-194:mirbase
Length = 58
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtgga 43
||||||||||||||||||||||
Sbjct: 1 tgtaacagcaactccatgtgga 22
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ttccagtggagatgctgttac 75
|||||||||||||||||||||
Sbjct: 35 ttccagtggagatgctgttac 55
>31523_oan-mir-194-1:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgtaacagcaactccatgtgga 43
||||||||||||||||||||||
Sbjct: 22 tgtaacagcaactccatgtgga 43
>34346_dre-mir-194b:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 12 gctctctgggtgtaacagcaactccatgtggaagatgc 49
|||| |||||||||||||| |||||||||||| ||||
Sbjct: 1 gctcgctgggtgtaacagccgctccatgtggaaaatgc 38
