miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>34253_dre-mir-34:mirbase
          Length = 98

 Score =  155 bits (78), Expect = 6e-39
 Identities = 81/82 (98%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 9  agtggttctctggcagtgtcttagctggttgttgtgtggagtgagaacgaagcaatcagc 68

                                
Query: 61 aagtatactgccgcagaaactc 82
          ||||||||||||||||||||||
Sbjct: 69 aagtatactgccgcagaaactc 90




>27360_mdo-mir-34a:mirbase
          Length = 111

 Score = 81.8 bits (41), Expect = 7e-17
 Identities = 66/73 (90%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcag 59
          |||| |||| |||||||||||||||||||||||||||| | | || || |||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagtaatagataaggaagcaatcag 71

                       
Query: 60 caagtatactgcc 72
          |||||||||||||
Sbjct: 72 caagtatactgcc 84




>27557_lla-mir-34a:mirbase
          Length = 111

 Score = 81.8 bits (41), Expect = 7e-17
 Identities = 66/73 (90%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcag 59
          |||| |||| |||||||||||||||||||||||||||| | | | ||| |||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtgaaggaagcaatcag 71

                       
Query: 60 caagtatactgcc 72
          |||||||||||||
Sbjct: 72 caagtatactgcc 84




>27604_sla-mir-34a:mirbase
          Length = 111

 Score = 81.8 bits (41), Expect = 7e-17
 Identities = 66/73 (90%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcag 59
          |||| |||| |||||||||||||||||||||||||||| | | | ||| |||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtgaaggaagcaatcag 71

                       
Query: 60 caagtatactgcc 72
          |||||||||||||
Sbjct: 72 caagtatactgcc 84




>27691_mml-mir-34a:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||| |||| |||||||||||||||||||||||||||| | |   || ||||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcagc 71

                      
Query: 61 aagtatactgcc 72
          ||||||||||||
Sbjct: 72 aagtatactgcc 83




>28197_mne-mir-34a:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||| |||| |||||||||||||||||||||||||||| | |   || ||||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcagc 71

                      
Query: 61 aagtatactgcc 72
          ||||||||||||
Sbjct: 72 aagtatactgcc 83




>28285_ggo-mir-34a:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||| |||| |||||||||||||||||||||||||||| | |   || ||||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcagc 71

                      
Query: 61 aagtatactgcc 72
          ||||||||||||
Sbjct: 72 aagtatactgcc 83




>28401_hsa-mir-34a:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||| |||| |||||||||||||||||||||||||||| | |   || ||||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcagc 71

                      
Query: 61 aagtatactgcc 72
          ||||||||||||
Sbjct: 72 aagtatactgcc 83




>30072_ppa-mir-34a:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||| |||| |||||||||||||||||||||||||||| | |   || ||||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcagc 71

                      
Query: 61 aagtatactgcc 72
          ||||||||||||
Sbjct: 72 aagtatactgcc 83




>30187_ptr-mir-34a:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||| |||| |||||||||||||||||||||||||||| | |   || ||||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcagc 71

                      
Query: 61 aagtatactgcc 72
          ||||||||||||
Sbjct: 72 aagtatactgcc 83




>30791_ppy-mir-34a:mirbase
          Length = 110

 Score = 79.8 bits (40), Expect = 3e-16
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcagc 60
          |||| |||| |||||||||||||||||||||||||||| | |   || ||||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcagc 71

                      
Query: 61 aagtatactgcc 72
          ||||||||||||
Sbjct: 72 aagtatactgcc 83




>26663_cfa-mir-34a:mirbase
          Length = 66

 Score = 77.8 bits (39), Expect = 1e-15
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 tggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagtatact 69
          |||||||||||||||||||||||||||| | | | ||| |||||||||||||||||||||
Sbjct: 1  tggcagtgtcttagctggttgttgtgagtaatagtgaaggaagcaatcagcaagtatact 60

             
Query: 70 gcc 72
          |||
Sbjct: 61 gcc 63




>25925_gga-mir-34a:mirbase
          Length = 109

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 65/73 (89%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcag 59
          |||| |||| |||||||||||||||||||||||||||| | | |  || |||||||||||
Sbjct: 11 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagcaatcag 70

                       
Query: 60 caagtatactgcc 72
          |||||||||||||
Sbjct: 71 caagtatactgcc 83




>27496_age-mir-34a:mirbase
          Length = 111

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 65/73 (89%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcag 59
          |||| |||| |||||||||||||||||||||||||| | | | | ||| |||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgtgcaatagtgaaggaagcaatcag 71

                       
Query: 60 caagtatactgcc 72
          |||||||||||||
Sbjct: 72 caagtatactgcc 84




>33175_bta-mir-34a:mirbase
          Length = 107

 Score = 73.8 bits (37), Expect = 2e-14
 Identities = 65/73 (89%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagtga-gaacgaagcaatcag 59
          |||| |||| |||||||||||||||||||||||||||| | | | | | |||||||||||
Sbjct: 12 agtgtttctttggcagtgtcttagctggttgttgtgagtaataatgcaggaagcaatcag 71

                       
Query: 60 caagtatactgcc 72
          |||||||||||||
Sbjct: 72 caagtatactgcc 84




>26432_tgu-mir-34a:mirbase
          Length = 72

 Score = 71.9 bits (36), Expect = 7e-14
 Identities = 64/72 (88%), Gaps = 1/72 (1%)
 Strand = Plus / Plus

                                                                      
Query: 1  agtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcag 59
          |||| |||| |||||||||||||||||||||||||||| | | |  || |||||||||||
Sbjct: 1  agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtcaaggaagcaatcag 60

                      
Query: 60 caagtatactgc 71
          ||||||||||||
Sbjct: 61 caagtatactgc 72




>31815_mmu-mir-34a:mirbase
          Length = 102

 Score = 71.9 bits (36), Expect = 7e-14
 Identities = 61/68 (89%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  ttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagt 64
          |||| |||||||||||||||||||||||||||| | | |  || ||||||||||||||||
Sbjct: 15 ttctttggcagtgtcttagctggttgttgtgagtattagctaaggaagcaatcagcaagt 74

                  
Query: 65 atactgcc 72
          ||||||||
Sbjct: 75 atactgcc 82




>32697_rno-mir-34a:mirbase
          Length = 102

 Score = 71.9 bits (36), Expect = 7e-14
 Identities = 61/68 (89%), Gaps = 1/68 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  ttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagt 64
          |||| |||||||||||||||||||||||||||| | | |  || ||||||||||||||||
Sbjct: 15 ttctttggcagtgtcttagctggttgttgtgagtattagctaaggaagcaatcagcaagt 74

                  
Query: 65 atactgcc 72
          ||||||||
Sbjct: 75 atactgcc 82




>26984_eca-mir-34:mirbase
          Length = 63

 Score = 61.9 bits (31), Expect = 6e-11
 Identities = 56/63 (88%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                      
Query: 11 tggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagtatact 69
          |||||||||||||||||||||||||||| | | | |   |||||||||||||||||||||
Sbjct: 1  tggcagtgtcttagctggttgttgtgagtaatagtgcgggaagcaatcagcaagtatact 60

             
Query: 70 gcc 72
          |||
Sbjct: 61 gcc 63




>33948_ssc-mir-34a:mirbase
          Length = 76

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                           
Query: 6  ttctctggcagtgtcttagctggttgttgtgag 38
          |||| ||||||||||||||||||||||||||||
Sbjct: 2  ttctttggcagtgtcttagctggttgttgtgag 34




>25742_xtr-mir-34a:mirbase
          Length = 96

 Score = 56.0 bits (28), Expect = 4e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 1  agtggttctctggcagtgtcttagctggttgttgtg 36
          |||| |||| ||||||||||||||||||||||||||
Sbjct: 6  agtgtttctttggcagtgtcttagctggttgttgtg 41