miRNEST 2.0, an integrative microRNA resource :: BLAST
>34253_dre-mir-34:mirbase
Length = 98
Score = 157 bits (79), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 8 gagtggttctctggcagtgtcttagctggttgttgtgtggagtgagaacgaagcaatcag 67
Query: 61 caagtatactgccgcagaaactc 83
|||||||||||||||||||||||
Sbjct: 68 caagtatactgccgcagaaactc 90
>27360_mdo-mir-34a:mirbase
Length = 111
Score = 83.8 bits (42), Expect = 2e-17
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatca 59
||||| |||| |||||||||||||||||||||||||||| | | || || ||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagtaatagataaggaagcaatca 70
Query: 60 gcaagtatactgcc 73
||||||||||||||
Sbjct: 71 gcaagtatactgcc 84
>27557_lla-mir-34a:mirbase
Length = 111
Score = 83.8 bits (42), Expect = 2e-17
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatca 59
||||| |||| |||||||||||||||||||||||||||| | | | ||| ||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtgaaggaagcaatca 70
Query: 60 gcaagtatactgcc 73
||||||||||||||
Sbjct: 71 gcaagtatactgcc 84
>27604_sla-mir-34a:mirbase
Length = 111
Score = 83.8 bits (42), Expect = 2e-17
Identities = 67/74 (90%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatca 59
||||| |||| |||||||||||||||||||||||||||| | | | ||| ||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtgaaggaagcaatca 70
Query: 60 gcaagtatactgcc 73
||||||||||||||
Sbjct: 71 gcaagtatactgcc 84
>27691_mml-mir-34a:mirbase
Length = 110
Score = 81.8 bits (41), Expect = 7e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcag 70
Query: 61 caagtatactgcc 73
|||||||||||||
Sbjct: 71 caagtatactgcc 83
>28197_mne-mir-34a:mirbase
Length = 110
Score = 81.8 bits (41), Expect = 7e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcag 70
Query: 61 caagtatactgcc 73
|||||||||||||
Sbjct: 71 caagtatactgcc 83
>28285_ggo-mir-34a:mirbase
Length = 110
Score = 81.8 bits (41), Expect = 7e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcag 70
Query: 61 caagtatactgcc 73
|||||||||||||
Sbjct: 71 caagtatactgcc 83
>28401_hsa-mir-34a:mirbase
Length = 110
Score = 81.8 bits (41), Expect = 7e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcag 70
Query: 61 caagtatactgcc 73
|||||||||||||
Sbjct: 71 caagtatactgcc 83
>30072_ppa-mir-34a:mirbase
Length = 110
Score = 81.8 bits (41), Expect = 7e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcag 70
Query: 61 caagtatactgcc 73
|||||||||||||
Sbjct: 71 caagtatactgcc 83
>30187_ptr-mir-34a:mirbase
Length = 110
Score = 81.8 bits (41), Expect = 7e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcag 70
Query: 61 caagtatactgcc 73
|||||||||||||
Sbjct: 71 caagtatactgcc 83
>30791_ppy-mir-34a:mirbase
Length = 110
Score = 81.8 bits (41), Expect = 7e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtgagaacgaagcaatcag 60
||||| |||| |||||||||||||||||||||||||||| | | || |||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagtaaggaagcaatcag 70
Query: 61 caagtatactgcc 73
|||||||||||||
Sbjct: 71 caagtatactgcc 83
>26663_cfa-mir-34a:mirbase
Length = 66
Score = 77.8 bits (39), Expect = 1e-15
Identities = 58/63 (92%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 12 tggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagtatact 70
|||||||||||||||||||||||||||| | | | ||| |||||||||||||||||||||
Sbjct: 1 tggcagtgtcttagctggttgttgtgagtaatagtgaaggaagcaatcagcaagtatact 60
Query: 71 gcc 73
|||
Sbjct: 61 gcc 63
>25925_gga-mir-34a:mirbase
Length = 109
Score = 75.8 bits (38), Expect = 4e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatca 59
||||| |||| |||||||||||||||||||||||||||| | | | || ||||||||||
Sbjct: 10 gagtgtttctttggcagtgtcttagctggttgttgtgagcaatagttaaggaagcaatca 69
Query: 60 gcaagtatactgcc 73
||||||||||||||
Sbjct: 70 gcaagtatactgcc 83
>27496_age-mir-34a:mirbase
Length = 111
Score = 75.8 bits (38), Expect = 4e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatca 59
||||| |||| |||||||||||||||||||||||||| | | | | ||| ||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgtgcaatagtgaaggaagcaatca 70
Query: 60 gcaagtatactgcc 73
||||||||||||||
Sbjct: 71 gcaagtatactgcc 84
>33175_bta-mir-34a:mirbase
Length = 107
Score = 75.8 bits (38), Expect = 4e-15
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtgaggagtga-gaacgaagcaatca 59
||||| |||| |||||||||||||||||||||||||||| | | | | | ||||||||||
Sbjct: 11 gagtgtttctttggcagtgtcttagctggttgttgtgagtaataatgcaggaagcaatca 70
Query: 60 gcaagtatactgcc 73
||||||||||||||
Sbjct: 71 gcaagtatactgcc 84
>26432_tgu-mir-34a:mirbase
Length = 72
Score = 71.9 bits (36), Expect = 7e-14
Identities = 64/72 (88%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 2 agtggttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcag 60
|||| |||| |||||||||||||||||||||||||||| | | | || |||||||||||
Sbjct: 1 agtgtttctttggcagtgtcttagctggttgttgtgagcaatagtcaaggaagcaatcag 60
Query: 61 caagtatactgc 72
||||||||||||
Sbjct: 61 caagtatactgc 72
>31815_mmu-mir-34a:mirbase
Length = 102
Score = 71.9 bits (36), Expect = 7e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 7 ttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagt 65
|||| |||||||||||||||||||||||||||| | | | || ||||||||||||||||
Sbjct: 15 ttctttggcagtgtcttagctggttgttgtgagtattagctaaggaagcaatcagcaagt 74
Query: 66 atactgcc 73
||||||||
Sbjct: 75 atactgcc 82
>32697_rno-mir-34a:mirbase
Length = 102
Score = 71.9 bits (36), Expect = 7e-14
Identities = 61/68 (89%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 7 ttctctggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagt 65
|||| |||||||||||||||||||||||||||| | | | || ||||||||||||||||
Sbjct: 15 ttctttggcagtgtcttagctggttgttgtgagtattagctaaggaagcaatcagcaagt 74
Query: 66 atactgcc 73
||||||||
Sbjct: 75 atactgcc 82
>26984_eca-mir-34:mirbase
Length = 63
Score = 61.9 bits (31), Expect = 7e-11
Identities = 56/63 (88%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 12 tggcagtgtcttagctggttgttgtgaggagt-gagaacgaagcaatcagcaagtatact 70
|||||||||||||||||||||||||||| | | | | |||||||||||||||||||||
Sbjct: 1 tggcagtgtcttagctggttgttgtgagtaatagtgcgggaagcaatcagcaagtatact 60
Query: 71 gcc 73
|||
Sbjct: 61 gcc 63
>25742_xtr-mir-34a:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 gagtggttctctggcagtgtcttagctggttgttgtg 37
||||| |||| ||||||||||||||||||||||||||
Sbjct: 5 gagtgtttctttggcagtgtcttagctggttgttgtg 41
>33948_ssc-mir-34a:mirbase
Length = 76
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 7 ttctctggcagtgtcttagctggttgttgtgag 39
|||| ||||||||||||||||||||||||||||
Sbjct: 2 ttctttggcagtgtcttagctggttgttgtgag 34
