miRNEST 2.0, an integrative microRNA resource :: BLAST
>34283_dre-mir-126a:mirbase
Length = 101
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 tgcttcacggtccattattacttttggtacgcgctaggccagtctcaaactcgtaccgtg 60
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 14 tgcttcacagtccattattacttttggtacgcgctaggccagactcaaactcgtaccgtg 73
Query: 61 agtaataatgcactgtggc 79
|||||||||||||||||||
Sbjct: 74 agtaataatgcactgtggc 92
>34284_dre-mir-126b:mirbase
Length = 103
Score = 97.6 bits (49), Expect = 1e-21
Identities = 68/73 (93%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 5 tcacggtccattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagta 64
||||||| |||||||||||||||||||||||| |||| |||| |||||||||||||||||
Sbjct: 15 tcacggttcattattacttttggtacgcgctatgccactctc-aactcgtaccgtgagta 73
Query: 65 ataatgcactgtg 77
||| |||||||||
Sbjct: 74 atagtgcactgtg 86
>34590_fru-mir-126:mirbase
Length = 63
Score = 87.7 bits (44), Expect = 1e-18
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 12 ccattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||
Sbjct: 5 ccattattacttttggtacgcgctatgccactctc-aactcgtaccgtgagtaataatgc 63
>34737_tni-mir-126:mirbase
Length = 63
Score = 87.7 bits (44), Expect = 1e-18
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 12 ccattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||
Sbjct: 5 ccattattacttttggtacgcgctatgccactctc-aactcgtaccgtgagtaataatgc 63
>26455_tgu-mir-126:mirbase
Length = 132
Score = 81.8 bits (41), Expect = 7e-17
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 7 acggtccattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaat 66
|||| |||||||||||||||||||||||| | || | ||||||||||||||||||||||
Sbjct: 58 acggcccattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaat 116
Query: 67 aatgcactgtggc 79
||||| |||||||
Sbjct: 117 aatgcgctgtggc 129
>25944_gga-mir-126:mirbase
Length = 84
Score = 79.8 bits (40), Expect = 3e-16
Identities = 65/72 (90%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 7 acggtccattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaat 66
|||| |||||||||||||||||||||||| | || | ||||||||||||||||||||||
Sbjct: 8 acggcccattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaat 66
Query: 67 aatgcactgtgg 78
||||| ||||||
Sbjct: 67 aatgcgctgtgg 78
>27721_mml-mir-126:mirbase
Length = 85
Score = 71.9 bits (36), Expect = 7e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgca 72
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgcg 73
Query: 73 ctgt 76
||||
Sbjct: 74 ctgt 77
>33204_bta-mir-126:mirbase
Length = 73
Score = 71.9 bits (36), Expect = 7e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgca 72
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgcg 67
Query: 73 ctgt 76
||||
Sbjct: 68 ctgt 71
>33973_ssc-mir-126:mirbase
Length = 73
Score = 71.9 bits (36), Expect = 7e-14
Identities = 58/64 (90%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgca 72
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgcg 67
Query: 73 ctgt 76
||||
Sbjct: 68 ctgt 71
>26692_cfa-mir-126:mirbase
Length = 59
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 1 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 58
>27013_eca-mir-126:mirbase
Length = 73
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 66
>27014_eca-mir-126:mirbase
Length = 73
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 66
>28434_hsa-mir-126:mirbase
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 72
>30212_ptr-mir-126:mirbase
Length = 84
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 14 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 71
>30821_ppy-mir-126:mirbase
Length = 81
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 72
>31847_mmu-mir-126:mirbase
Length = 73
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 66
>31848_mmu-mir-126:mirbase
Length = 73
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 66
>32725_rno-mir-126:mirbase
Length = 73
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 66
>33060_rno-mir-3567:mirbase
Length = 118
Score = 69.9 bits (35), Expect = 3e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 86 cattattacttttggtacgcgctgtgacact-tcaaactcgtaccgtgagtaataatgc 29
>31481_oan-mir-126:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 2e-11
Identities = 54/60 (90%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 12 ccattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
|||||||||||||||||||||||| | | | |||||||||||||||||||||||||||
Sbjct: 28 ccattattacttttggtacgcgctgtgacgct-tcaaactcgtaccgtgagtaataatgc 86
>25767_xtr-mir-126:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || |||||||||||||||||||||||||||
Sbjct: 8 cattattacttttggtacgcgctgtgtcaca-tcaaactcgtaccgtgagtaataatgc 65
>27377_mdo-mir-126:mirbase
Length = 69
Score = 61.9 bits (31), Expect = 6e-11
Identities = 53/59 (89%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 13 cattattacttttggtacgcgctaggccagtctcaaactcgtaccgtgagtaataatgc 71
||||||||||||||||||||||| | || |||||||||||||||||||||||||||
Sbjct: 5 cattattacttttggtacgcgctgtgacaca-tcaaactcgtaccgtgagtaataatgc 62
>24832_cin-mir-126:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 ctcgtaccgtgagtaataa 68
|||||||||||||||||||
Sbjct: 49 ctcgtaccgtgagtaataa 67
>25326_csa-mir-126:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 ctcgtaccgtgagtaataa 68
|||||||||||||||||||
Sbjct: 65 ctcgtaccgtgagtaataa 83
>25475_pma-mir-126:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 50 ctcgtaccgtgagtaataa 68
|||||||||||||||||||
Sbjct: 44 ctcgtaccgtgagtaataa 62
