miRNEST 2.0, an integrative microRNA resource :: BLAST
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 103 bits (52), Expect = 2e-23
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 10 aggtcacaatcaacattcattgctgtcggtgggttgtgagatgtgaggcanaactcaccg 69
|||||||||||||||||||||| ||||||||||||||||| |||||| || |||||
Sbjct: 25 aggtcacaatcaacattcattgttgtcggtgggttgtgaggactgaggccagacccaccg 84
Query: 70 atggatgaatgtcactgtggctgggccagac 100
|||||||||||||||||||||||||||||
Sbjct: 85 ggggatgaatgtcactgtggctgggccagac 115
>27772_mml-mir-181d:mirbase
Length = 137
Score = 97.6 bits (49), Expect = 1e-21
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 9 aaggtcacaatcaacattcattgctgtcggtgggttgtgagatgtgaggcanaactcacc 68
||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||
Sbjct: 24 aaggtcacaatcaacattcattgttgtcggtgggttgtgaggaccgaggccagacccacc 83
Query: 69 gatggatgaatgtcactgtggctgggccagac 100
| |||||||||||||||||||||||||||||
Sbjct: 84 gggggatgaatgtcactgtggctgggccagac 115
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 97.6 bits (49), Expect = 1e-21
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 9 aaggtcacaatcaacattcattgctgtcggtgggttgtgagatgtgaggcanaactcacc 68
||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggttgtgaggaccgaggccagacccacc 82
Query: 69 gatggatgaatgtcactgtggctgggccagac 100
| |||||||||||||||||||||||||||||
Sbjct: 83 gggggatgaatgtcactgtggctgggccagac 114
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 95.6 bits (48), Expect = 6e-21
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 10 aggtcacaatcaacattcattgctgtcggtgggttgtgagatgtgaggcanaactcaccg 69
|||||||||||||||||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 24 aggtcacaatcaacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccg 83
Query: 70 atggatgaatgtcactgtggctgggccagac 100
|||||||||||||||||||||||||||||
Sbjct: 84 ggggatgaatgtcactgtggctgggccagac 114
>33249_bta-mir-181d:mirbase
Length = 113
Score = 93.7 bits (47), Expect = 2e-20
Identities = 81/92 (88%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 9 aaggtcacaatcaacattcattgctgtcggtgggttgtgagatgtgaggcanaactcacc 68
||||||||||||||||||||||| |||||||||||||||| | ||| | || ||||
Sbjct: 23 aaggtcacaatcaacattcattgttgtcggtgggttgtgaca---gagaccagacccacc 79
Query: 69 gatggatgaatgtcactgtggctgggccagac 100
|| |||||||||||||||||||||||||||||
Sbjct: 80 gagggatgaatgtcactgtggctgggccagac 111
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 91.7 bits (46), Expect = 9e-20
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 13 tcacaatcaacattcattgctgtcggtgggttgtgagatgtgaggcanaactcaccgatg 72
||||||||||||||||||| |||||||||||||||||| | ||||| || |||||| |
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttgtgagacg-gaggccagacccaccgagg 59
Query: 73 gatgaatgtcactgtggctgg 93
|||||||||||||||||||||
Sbjct: 60 gatgaatgtcactgtggctgg 80
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 91.7 bits (46), Expect = 9e-20
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 13 tcacaatcaacattcattgctgtcggtgggttgtgagatgtgaggcanaactcaccgatg 72
||||||||||||||||||| |||||||||||||||||| | ||||| || |||||| |
Sbjct: 1 tcacaatcaacattcattgttgtcggtgggttgtgagacg-gaggccagacccaccgagg 59
Query: 73 gatgaatgtcactgtggctgg 93
|||||||||||||||||||||
Sbjct: 60 gatgaatgtcactgtggctgg 80
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 79.8 bits (40), Expect = 3e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 6 acaaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 acaaaggtcacaatcaacattcattgctgtcggtgggttg 60
>27579_lla-mir-181b:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>28223_mne-mir-181b:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||||
Sbjct: 23 aaaggtcacaatcaacattcattgctgtcggtgggttg 60
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 9 aaggtcacaatcaacattcattgctgtcggtgggttg 45
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggttg 37
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggtt 44
|||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaaggtcacaatcaacattcattgctgtcggtgggtt 38
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggtt 44
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtt 37
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 8 aaaggtcacaatcaacattcattgctgtcggtgggtt 44
|||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaggtcacaatcaacattcattgctgtcggtgggtt 37
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 9 aaggtcacaatcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaggtcacaatcaacattcattgctgtcggtgggtt 36
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 71.9 bits (36), Expect = 8e-14
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 10 aggtcacaatcaacattcattgctgtcggtgggttg 45
||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtcacaatcaacattcattgctgtcggtgggttg 36
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 11 ggtcacaatcaacattcattgctgtcggtgggttg 45
|||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcacaatcaacattcattgctgtcggtgggttg 35
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 7 caaaggtcacaatcaacattcattgctgtcggtgggtt 44
||||||||| ||||||||||||||||||||||||||||
Sbjct: 23 caaaggtcataatcaacattcattgctgtcggtgggtt 60
>31512_oan-mir-181c:mirbase
Length = 95
Score = 65.9 bits (33), Expect = 5e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 12 gtcacaatcaacattcattgctgtcggtgggttgtga 48
||||||||||||||||||| |||||||||||||||||
Sbjct: 10 gtcacaatcaacattcattactgtcggtgggttgtga 46
>31511_oan-mir-181b:mirbase
Length = 110
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 5 aacaaaggtcacaatcaacattcattgctgtcggtgggtt 44
|||||||||| |||| ||||||||||||||||||||||||
Sbjct: 11 aacaaaggtcccaatgaacattcattgctgtcggtgggtt 50
>32767_rno-mir-181d:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 8e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 11 ggtcacaatcaacattcattgctgtcggtgggttgtgag 49
||||||||| ||||||||||| |||||||||||||||||
Sbjct: 1 ggtcacaattaacattcattgttgtcggtgggttgtgag 39
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 11 ggtcacaatcaacattcattgctgtcggtgggtt 44
||||||||| ||||||||||||||||||||||||
Sbjct: 1 ggtcacaatgaacattcattgctgtcggtgggtt 34
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 16 caatcaacattcattgctgtcggtgggtt 44
|||||||||||||||||||||||||||||
Sbjct: 11 caatcaacattcattgctgtcggtgggtt 39
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 16 caatcaacattcattgctgtcggtgggtt 44
|||||||||||||||||||||||||||||
Sbjct: 6 caatcaacattcattgctgtcggtgggtt 34
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 caatcaacattcattgctgtcggtgggttgt 46
|||| ||||||||||||||||||||||||||
Sbjct: 9 caataaacattcattgctgtcggtgggttgt 39
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 15 acaatcaacattcattgctgtcggtgggttgtgag 49
||||| ||||||||||| |||||||||||||||||
Sbjct: 1 acaattaacattcattgttgtcggtgggttgtgag 35
>27062_eca-mir-181b:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 13 tcaacattcattgctgtcggtgggtt 38
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 14 tcaacattcattgctgtcggtgggtt 39
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 19 tcaacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||||
Sbjct: 11 tcaacattcattgctgtcggtgggtt 36
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 aacattcattgctgtcggtgggttg 45
|||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttg 25
>26736_cfa-mir-181d:mirbase
Length = 64
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 21 aacattcattgctgtcggtgggttgtgag 49
||||||||||| |||||||||||||||||
Sbjct: 1 aacattcattgttgtcggtgggttgtgag 29
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 caatcaacattcattgctgtcggtgggtt 44
|||| ||||||||||||||||||||||||
Sbjct: 11 caataaacattcattgctgtcggtgggtt 39
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 caatcaacattcattgctgtcggtgggtt 44
|||| ||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 caatcaacattcattgctgtcggtgggtt 44
|||| ||||||||||||||||||||||||
Sbjct: 6 caataaacattcattgctgtcggtgggtt 34
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 aacattcattgctgtcggtgggtt 44
||||||||||||||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
>34332_dre-mir-181c:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 acattcattgctgtcggtgggtt 44
|||||||||||||||||||||||
Sbjct: 13 acattcattgctgtcggtgggtt 35
