miRNEST 2.0, an integrative microRNA resource :: BLAST
>34678_tni-let-7e:mirbase
Length = 100
Score = 167 bits (84), Expect = 2e-42
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 8 gctgtccttggggctgaggtagtagattgaatagttgtggggttgtgtaacctctttttg 67
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 1 gctgtccttggggctgaggtagtagattgaatagttgtggggttgtgtgacctctatgtg 60
Query: 68 agataactatacagtctactgtctttcccaaggagacagc 107
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61 agataactatacaatctactgtctttcccaaggagacagc 100
>34530_fru-let-7e:mirbase
Length = 100
Score = 151 bits (76), Expect = 1e-37
Identities = 94/100 (94%)
Strand = Plus / Plus
Query: 8 gctgtccttggggctgaggtagtagattgaatagttgtggggttgtgtaacctctttttg 67
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct: 1 gctgtccttggggttgaggtagtagattgaatagttgtggggttgtgtgacctcttagtg 60
Query: 68 agataactatacagtctactgtctttcccaaggagacagc 107
||||||||||||| |||||||||||||| |||||||||||
Sbjct: 61 agataactatacaatctactgtctttcctaaggagacagc 100
>34176_dre-let-7e-1:mirbase
Length = 100
Score = 87.7 bits (44), Expect = 2e-18
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 8 gctgtccttggggctgaggtagtagattgaatagttgtggggttgtgtaacctctttttg 67
||||| |||||||||||||||||||||||||||||||||| | || |||| | ||
Sbjct: 1 gctgttcttggggctgaggtagtagattgaatagttgtggagccctgcgctctctctctg 60
Query: 68 agataactatacagtctactgtctttcccaaggagacagc 107
||||||||||||| |||||||||||||| |||| ||||||
Sbjct: 61 agataactatacaatctactgtctttcctaaggcgacagc 100
>34177_dre-let-7e-2:mirbase
Length = 100
Score = 87.7 bits (44), Expect = 2e-18
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 8 gctgtccttggggctgaggtagtagattgaatagttgtggggttgtgtaacctctttttg 67
||||| |||||||||||||||||||||||||||||||||| | || |||| | ||
Sbjct: 1 gctgttcttggggctgaggtagtagattgaatagttgtggagccctgcgctctctctctg 60
Query: 68 agataactatacagtctactgtctttcccaaggagacagc 107
||||||||||||| |||||||||||||| |||| ||||||
Sbjct: 61 agataactatacaatctactgtctttcctaaggcgacagc 100
>26383_tgu-let-7e:mirbase
Length = 92
Score = 77.8 bits (39), Expect = 2e-15
Identities = 81/94 (86%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 12 tccttggggctgaggtagtagattgaatagttgtggggttgtgtaacctctttttgagat 71
|||||| ||||||||||||||||||||||||||||| || || |||| | |||| |
Sbjct: 1 tccttgaggctgaggtagtagattgaatagttgtggagtctggt--cctccctctgagct 58
Query: 72 aactatacagtctactgtctttcccaaggagaca 105
||||||||| |||||||||||||| |||||||||
Sbjct: 59 aactatacaatctactgtctttcctaaggagaca 92
>25878_gga-let-7k:mirbase
Length = 83
Score = 75.8 bits (38), Expect = 6e-15
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 19 ggctgaggtagtagattgaatagttgtggggttgtgtaacctctttttgagataactata 78
||||||||||||||||||||||||||||| || || |||| |||||| ||||||||
Sbjct: 1 ggctgaggtagtagattgaatagttgtggagt--cctatcctccctttgagctaactata 58
Query: 79 cagtctactgtctttcccaaggaga 103
|| |||||||||||||| |||||||
Sbjct: 59 caatctactgtctttcctaaggaga 83
>31412_oan-let-7e:mirbase
Length = 122
Score = 75.8 bits (38), Expect = 6e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 9 ctgtccttggggctgaggtagtagattgaatagttgtggggt 50
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 17 ctgtccttgaggctgaggtagtagattgaatagttgtggggt 58
>27320_mdo-let-7a-3:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 66 tgagataactatacagtctactgtctttccc 96
|||||||||||||||||||||||||||||||
Sbjct: 49 tgagataactatacagtctactgtctttccc 79
>27324_mdo-let-7f-2:mirbase
Length = 80
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 48 gagataactatacagtctactgtctttccca 78
>27637_mml-let-7f-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>28347_hsa-let-7f-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>30134_ptr-let-7f-2:mirbase
Length = 82
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>30739_ppy-let-7f-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>31414_oan-let-7f-2:mirbase
Length = 130
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 74 gagataactatacagtctactgtctttccca 104
>31760_mmu-let-7f-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>32646_rno-let-7f-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>33116_bta-let-7f-2:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>33902_ssc-let-7f:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 51 gagataactatacagtctactgtctttccca 81
>34180_dre-let-7g-2:mirbase
Length = 97
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 57 gagataactatacagtctactgtctttccca 87
>34531_fru-let-7g:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 49 gagataactatacagtctactgtctttccca 79
>34679_tni-let-7g:mirbase
Length = 79
Score = 61.9 bits (31), Expect = 9e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccca 97
|||||||||||||||||||||||||||||||
Sbjct: 49 gagataactatacagtctactgtctttccca 79
>31752_mmu-let-7a-1:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcccaagg 100
|||||||||||||| |||||||||||||| ||||
Sbjct: 57 gagataactatacaatctactgtctttcctaagg 90
>32638_rno-let-7a-1:mirbase
Length = 94
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcccaagg 100
|||||||||||||| |||||||||||||| ||||
Sbjct: 57 gagataactatacaatctactgtctttcctaagg 90
>25681_xtr-let-7f:mirbase
Length = 83
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||||| ||||||||||||
Sbjct: 51 gagataactatacagtttactgtctttcc 79
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||| ||||||
Sbjct: 8 tgaggtagtagattgtatagttttggggt 36
>25868_gga-let-7a-1:mirbase
Length = 90
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||| ||||||||||||||
Sbjct: 57 gagataactatacaatctactgtctttcc 85
>26610_cfa-let-7f:mirbase
Length = 78
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 1 tgaggtagtagattgtatagttgtggggt 29
>26934_eca-let-7f:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggt 35
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggt 35
>27629_mml-let-7a-1:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||| ||||||||||||||
Sbjct: 50 gagataactatacaatctactgtctttcc 78
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggt 35
>28339_hsa-let-7a-1:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||| ||||||||||||||
Sbjct: 50 gagataactatacaatctactgtctttcc 78
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggt 35
>30126_ptr-let-7a-1:mirbase
Length = 79
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||| ||||||||||||||
Sbjct: 49 gagataactatacaatctactgtctttcc 77
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 6 tgaggtagtagattgtatagttgtggggt 34
>30731_ppy-let-7a-1:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||| ||||||||||||||
Sbjct: 50 gagataactatacaatctactgtctttcc 78
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggt 35
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggt 36
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggt 36
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 86 tgaggtagtagattgtatagttgtggggt 58
>33108_bta-let-7a-1:mirbase
Length = 80
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||| ||||||||||||||
Sbjct: 50 gagataactatacaatctactgtctttcc 78
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggt 35
>33899_ssc-let-7a-2:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttcc 95
|||||||||||||| ||||||||||||||
Sbjct: 55 gagataactatacaatctactgtctttcc 83
>25870_gga-let-7a-3:mirbase
Length = 76
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 agataactatacagtctactgtctttcc 95
||||||||||||| ||||||||||||||
Sbjct: 48 agataactatacaatctactgtctttcc 75
>26375_tgu-let-7a-1:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 68 agataactatacagtctactgtctttcc 95
||||||||||||| ||||||||||||||
Sbjct: 55 agataactatacaatctactgtctttcc 82
>27318_mdo-let-7a-1:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttc 94
|||||||||||||| |||||||||||||
Sbjct: 59 gagataactatacaatctactgtctttc 86
>34179_dre-let-7g-1:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttc 94
||||||||||||||| ||||||||||||
Sbjct: 56 gagataactatacagcctactgtctttc 83
>25680_xtr-let-7e-2:mirbase
Length = 93
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gataactatacagtctactgtctttcc 95
|||||||||||| ||||||||||||||
Sbjct: 56 gataactatacaatctactgtctttcc 82
>27631_mml-let-7a-3:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gataactatacagtctactgtctttcc 95
|||||||||||| ||||||||||||||
Sbjct: 47 gataactatacaatctactgtctttcc 73
>28341_hsa-let-7a-3:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gataactatacagtctactgtctttcc 95
|||||||||||| ||||||||||||||
Sbjct: 47 gataactatacaatctactgtctttcc 73
>30128_ptr-let-7a-3:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gataactatacagtctactgtctttcc 95
|||||||||||| ||||||||||||||
Sbjct: 46 gataactatacaatctactgtctttcc 72
>30733_ppy-let-7a-3:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gataactatacagtctactgtctttcc 95
|||||||||||| ||||||||||||||
Sbjct: 47 gataactatacaatctactgtctttcc 73
>33110_bta-let-7a-3:mirbase
Length = 74
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 69 gataactatacagtctactgtctttcc 95
|||||||||||| ||||||||||||||
Sbjct: 47 gataactatacaatctactgtctttcc 73
>25413_pma-let-7c:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttccc 96
||||||||||| || |||||||||||||||
Sbjct: 58 gagataactatgcaatctactgtctttccc 87
>25874_gga-let-7f:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||| ||||
Sbjct: 7 tgaggtagtagattgtatagttgtagggt 35
>26384_tgu-let-7f:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||| ||||
Sbjct: 11 tgaggtagtagattgtatagttgtagggt 39
>26605_cfa-let-7a-1:mirbase
Length = 69
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 taactatacagtctactgtctttcc 95
|||||||||| ||||||||||||||
Sbjct: 45 taactatacaatctactgtctttcc 69
>26930_eca-let-7a-2:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 taactatacagtctactgtctttcc 95
|||||||||| ||||||||||||||
Sbjct: 49 taactatacaatctactgtctttcc 73
>31756_mmu-let-7c-2:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 taactatacagtctactgtctttcc 95
|||||||||| ||||||||||||||
Sbjct: 59 taactatacaatctactgtctttcc 83
>32642_rno-let-7c-2:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 taactatacagtctactgtctttcc 95
|||||||||| ||||||||||||||
Sbjct: 59 taactatacaatctactgtctttcc 83
>34178_dre-let-7f:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 tgaggtagtagattgaatagttgtggggt 50
||||||||||||||| |||||||| ||||
Sbjct: 20 tgaggtagtagattgtatagttgtagggt 48
>34165_dre-let-7a-1:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 67 gagataactatacagtctactgtctttc 94
|||||||||||||| ||||||||||||
Sbjct: 54 gagataactatacaacctactgtctttc 81
