miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>34800_tni-mir-429:mirbase
          Length = 87

 Score =  157 bits (79), Expect = 2e-39
 Identities = 85/87 (97%)
 Strand = Plus / Plus

                                                                      
Query: 7  agcctgttgataggcgtcttaccagacatggttagatgtaattattggtgtctaatactg 66
          ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1  agcctgttgataggcgtcttaccagacatggttagatgtaattattgttgtctaatactg 60

                                     
Query: 67 tctggtaatgccgtccattgaatggca 93
          ||||||||||||||||||| |||||||
Sbjct: 61 tctggtaatgccgtccattaaatggca 87




>34652_fru-mir-429:mirbase
          Length = 76

 Score =  143 bits (72), Expect = 3e-35
 Identities = 75/76 (98%)
 Strand = Plus / Plus

                                                                      
Query: 9  cctgttgataggcgtcttaccagacatggttagatgtaattattggtgtctaatactgtc 68
          ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1  cctgttgataggcgtcttaccagacatggttagatgtaattattgttgtctaatactgtc 60

                          
Query: 69 tggtaatgccgtccat 84
          ||||||||||||||||
Sbjct: 61 tggtaatgccgtccat 76




>34400_dre-mir-429:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 69/74 (93%)
 Strand = Plus / Plus

                                                                      
Query: 11 tgttgataggcgtcttaccagacatggttagatgtaattattggtgtctaatactgtctg 70
          ||||||| | |||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 3  tgttgatggacgtcttaccagacatggttagatgtaataacttgtgtctaatactgtctg 62

                        
Query: 71 gtaatgccgtccat 84
          ||||||||||||||
Sbjct: 63 gtaatgccgtccat 76




>26843_cfa-mir-429:mirbase
          Length = 85

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                      
Query: 7  agcctgttgataggcgtcttaccagacatggttagatgtaattattggtgtctaatactg 66
          |||||| |||| |||||||||||||||| |||||||| |   |  |||||||||||||||
Sbjct: 1  agcctgctgatgggcgtcttaccagacacggttagatctgggttctggtgtctaatactg 60

                        
Query: 67 tctggtaatgccgt 80
          ||||||||||||||
Sbjct: 61 tctggtaatgccgt 74




>25860_xtr-mir-429:mirbase
          Length = 87

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                     
Query: 22 gtcttaccagacatggttagatgtaattattggtgtctaatactgtctggtaatgccgt 80
          ||||||||||||| |||||||| || ||| |   |||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacaaggttagatctagttactctcgtctaatactgtctggtaatgccgt 74




>32910_rno-mir-429:mirbase
          Length = 85

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                      
Query: 22 gtcttaccagacatggttagatgtaattattggtgtctaatactgtctggtaatgccgtc 81
          |||||||||||||||||||||| |   | |   |||||||||||||||||||||||||||
Sbjct: 16 gtcttaccagacatggttagatctggatgtatctgtctaatactgtctggtaatgccgtc 75

             
Query: 82 cat 84
          |||
Sbjct: 76 cat 78




>34094_ssc-mir-429:mirbase
          Length = 81

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 55 tgtctaatactgtctggtaatgccgtccatt 85
          |||||||||||||||||||||||||||||||
Sbjct: 46 tgtctaatactgtctggtaatgccgtccatt 76




>25673_xla-mir-429:mirbase
          Length = 68

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 55 tgtctaatactgtctggtaatgccgtccat 84
          ||||||||||||||||||||||||||||||
Sbjct: 39 tgtctaatactgtctggtaatgccgtccat 68




>27176_eca-mir-429:mirbase
          Length = 67

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 55 tgtctaatactgtctggtaatgccgtccat 84
          ||||||||||||||||||||||||||||||
Sbjct: 38 tgtctaatactgtctggtaatgccgtccat 67




>31552_oan-mir-429:mirbase
          Length = 112

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                      
Query: 8  gcctgttgataggcgtcttaccagacatggttagatgtaattattggtgtctaatactgt 67
          ||||| |||| || |||||||||||||  ||||||| | | ||||   ||||||||||||
Sbjct: 13 gcctgctgattggtgtcttaccagacaaagttagatctgactattttcgtctaatactgt 72

                        
Query: 68 ctggtaatgccgtc 81
          ||||||||||||||
Sbjct: 73 ctggtaatgccgtc 86




>32069_mmu-mir-429:mirbase
          Length = 83

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 55 tgtctaatactgtctggtaatgccgtccat 84
          ||||||||||||||||||||||||||||||
Sbjct: 47 tgtctaatactgtctggtaatgccgtccat 76




>33372_bta-mir-429:mirbase
          Length = 84

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 55 tgtctaatactgtctggtaatgccgtccat 84
          ||||||||||||||||||||||||||||||
Sbjct: 48 tgtctaatactgtctggtaatgccgtccat 77




>26026_gga-mir-429:mirbase
          Length = 84

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                      
Query: 22 gtcttaccagacatggttagatgtaattattggtgtctaatactgtctggtaatgccgtc 81
          |||||||||| ||  ||||||| ||  ||||  |||||||||||||||||||||||||||
Sbjct: 15 gtcttaccaggcaaagttagatctagctatttctgtctaatactgtctggtaatgccgtc 74




>27450_mdo-mir-429:mirbase
          Length = 72

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                   
Query: 22 gtcttaccagacatggttagatgtaattattggtgtctaatactgtctggtaatgcc 78
          |||||||||||||  ||||||| |   ||||  ||||||||||||||||||||||||
Sbjct: 8  gtcttaccagacaaagttagatctcgctatttctgtctaatactgtctggtaatgcc 64




>28649_hsa-mir-429:mirbase
          Length = 83

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 ggcgtcttaccagacatggttaga 42
          ||||||||||||||||||||||||
Sbjct: 13 ggcgtcttaccagacatggttaga 36



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 55 tgtctaatactgtctggtaatgccgtccat 84
          ||||||||||||||||||||  ||||||||
Sbjct: 47 tgtctaatactgtctggtaaaaccgtccat 76




>31003_ppy-mir-429:mirbase
          Length = 80

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 ggcgtcttaccagacatggttaga 42
          ||||||||||||||||||||||||
Sbjct: 13 ggcgtcttaccagacatggttaga 36



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 55 tgtctaatactgtctggtaatgccgtccat 84
          ||||||||||||||||||||  ||||||||
Sbjct: 47 tgtctaatactgtctggtaaaaccgtccat 76




>27902_mml-mir-429:mirbase
          Length = 83

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 55 tgtctaatactgtctggtaatgccgtccat 84
          ||||||||||||||||||||  ||||||||
Sbjct: 47 tgtctaatactgtctggtaaaaccgtccat 76




>34401_dre-mir-429b:mirbase
          Length = 110

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 54 gtgtctaatactgtctggtaatgcc 78
          ||||||||||||| |||||||||||
Sbjct: 62 gtgtctaatactgcctggtaatgcc 86




>34889_sko-mir-200:mirbase
          Length = 101

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 57 tctaatactgtctggtaatg 76
          ||||||||||||||||||||
Sbjct: 59 tctaatactgtctggtaatg 78