miRNEST 2.0, an integrative microRNA resource :: BLAST
>34630_fru-mir-202:mirbase
Length = 69
Score = 89.7 bits (45), Expect = 3e-19
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 5 tcctttttcctatgcatatacctctttgagatgtaactttacacagaggcatagggcatg 64
||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||
Sbjct: 1 tcctttttcctatgcatatacctttttcagatgtaacttt--aaagaggcatagggcatg 58
Query: 65 ggaanatgggg 75
|||| ||||||
Sbjct: 59 ggaaaatgggg 69
>34777_tni-mir-202:mirbase
Length = 69
Score = 89.7 bits (45), Expect = 3e-19
Identities = 65/71 (91%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 5 tcctttttcctatgcatatacctctttgagatgtaactttacacagaggcatagggcatg 64
||||||||||||||||||||||| ||| |||||||||||| | ||||||||||||||||
Sbjct: 1 tcctttttcctatgcatatacctttttcagatgtaacttt--aaagaggcatagggcatg 58
Query: 65 ggaanatgggg 75
|||| ||||||
Sbjct: 59 ggaaaatgggg 69
>34358_dre-mir-202:mirbase
Length = 76
Score = 83.8 bits (42), Expect = 2e-17
Identities = 68/76 (89%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 1 ctgttcctttttcctatgcatatacctctttgagatgtaactttacacagaggcataggg 60
||||||||||||||||||||||||||||||||| ||| |||| | ||||||||||||
Sbjct: 1 ctgttcctttttcctatgcatatacctctttgacatgctgcttt--aaagaggcataggg 58
Query: 61 catgggaanatggggc 76
|||||||| |||||||
Sbjct: 59 catgggaaaatggggc 74
>25822_xtr-mir-202-1:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 ctgttcctttttcctatgcatatacctctttga 33
|||||||||||||||||||||||||||||||||
Sbjct: 5 ctgttcctttttcctatgcatatacctctttga 37
>25823_xtr-mir-202-2:mirbase
Length = 87
Score = 65.9 bits (33), Expect = 4e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 ctgttcctttttcctatgcatatacctctttga 33
|||||||||||||||||||||||||||||||||
Sbjct: 5 ctgttcctttttcctatgcatatacctctttga 37
>25993_gga-mir-202:mirbase
Length = 89
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 2 tgttcctttttcctatgcatatacctctttgaga 35
|||||||||||||||||||||||| |||||||||
Sbjct: 7 tgttcctttttcctatgcatatacttctttgaga 40
>33281_bta-mir-202:mirbase
Length = 99
Score = 60.0 bits (30), Expect = 2e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 ctgttcctttttcctatgcatatacctctttgag 34
||||||||||||||||||||||||| ||||||||
Sbjct: 9 ctgttcctttttcctatgcatatacttctttgag 42
>26762_cfa-mir-202:mirbase
Length = 71
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 gttcctttttcctatgcatatacctctttgag 34
||||||||||||||||||||||| ||||||||
Sbjct: 1 gttcctttttcctatgcatatacttctttgag 32
>28521_hsa-mir-202:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 gttcctttttcctatgcatatacctctttgag 34
||||||||||||||||||||||| ||||||||
Sbjct: 20 gttcctttttcctatgcatatacttctttgag 51
>30280_ptr-mir-202:mirbase
Length = 109
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 3 gttcctttttcctatgcatatacctctttgag 34
||||||||||||||||||||||| ||||||||
Sbjct: 20 gttcctttttcctatgcatatacttctttgag 51
>31927_mmu-mir-202:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 gttcctttttcctatgcatatacctctttg 32
||||||||||||||||||||||| ||||||
Sbjct: 1 gttcctttttcctatgcatatacttctttg 30
>31928_mmu-mir-202:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 gttcctttttcctatgcatatacctctttg 32
||||||||||||||||||||||| ||||||
Sbjct: 1 gttcctttttcctatgcatatacttctttg 30
>32792_rno-mir-202:mirbase
Length = 72
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 gttcctttttcctatgcatatacctctttg 32
||||||||||||||||||||||| ||||||
Sbjct: 1 gttcctttttcctatgcatatacttctttg 30
>26500_tgu-mir-202-1:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 ctttttcctatgcatatacctctttgaga 35
||||||||||||||||||| |||||||||
Sbjct: 1 ctttttcctatgcatatacttctttgaga 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 agaggcatagggcatgggaanatggggc 76
||||| |||||||||||||| |||||||
Sbjct: 41 agaggtatagggcatgggaaaatggggc 68
>26501_tgu-mir-202-2:mirbase
Length = 70
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 7 ctttttcctatgcatatacctctttgaga 35
||||||||||||||||||| |||||||||
Sbjct: 1 ctttttcctatgcatatacttctttgaga 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 49 agaggcatagggcatgggaanatggggc 76
||||| |||||||||||||| |||||||
Sbjct: 41 agaggtatagggcatgggaaaatggggc 68
>34033_ssc-mir-202:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ttcctatgcatatacctctttgag 34
||||||||||||||| ||||||||
Sbjct: 13 ttcctatgcatatacttctttgag 36
