miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48663_hvv-miR171:pmrd
          Length = 78

 Score =  155 bits (78), Expect = 9e-39
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                      
Query: 21 gatgttggctcgactcactcagaccacgccggagggagccatctgcggcggcggttctga 80
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gatgttggctcgactcactcagaccacgccggagggagccatctgcggcggcggttctga 60

                            
Query: 81 ttgagccgtgccaatatc 98
          ||||||||||||||||||
Sbjct: 61 ttgagccgtgccaatatc 78




>48662_hvv-miR170:pmrd
          Length = 78

 Score =  155 bits (78), Expect = 9e-39
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                      
Query: 21 gatgttggctcgactcactcagaccacgccggagggagccatctgcggcggcggttctga 80
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gatgttggctcgactcactcagaccacgccggagggagccatctgcggcggcggttctga 60

                            
Query: 81 ttgagccgtgccaatatc 98
          ||||||||||||||||||
Sbjct: 61 ttgagccgtgccaatatc 78




>55031_zma-miR171d:pmrd
          Length = 121

 Score = 69.9 bits (35), Expect = 4e-13
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 69  cggcggttctgattgagccgtgccaatatcttagtgctctttcatgc 115
           ||||| ||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 73  cggcgtttctgattgagccgtgccaatatctcagtactctttcatgc 119




>55032_zma-miR171e:pmrd
          Length = 126

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 75  ttctgattgagccgtgccaatatcttagtgctctttcatgca 116
           ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 84  ttctgattgagccgtgccaatatcttagtactcttccatgca 125



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 17 ctatgatgttggctcgactcactcagac 44
          |||||||||||||||| |||||||||||
Sbjct: 17 ctatgatgttggctcggctcactcagac 44




>48899_osa-miR171e:pmrd
          Length = 119

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 34/34 (100%)
 Strand = Plus / Plus

                                             
Query: 75  ttctgattgagccgtgccaatatcttagtgctct 108
           ||||||||||||||||||||||||||||||||||
Sbjct: 86  ttctgattgagccgtgccaatatcttagtgctct 119



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 17 ctatgatgttggctcgactcactcagac 44
          |||||||||||||||| |||||||||||
Sbjct: 7  ctatgatgttggctcggctcactcagac 34




>51689_ptc-miR171f:pmrd
          Length = 130

 Score = 63.9 bits (32), Expect = 2e-11
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 76  tctgattgagccgtgccaatatcttagtgctc 107
           ||||||||||||||||||||||||||||||||
Sbjct: 99  tctgattgagccgtgccaatatcttagtgctc 130




>54680_tae-miR170b:pmrd
          Length = 94

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                        
Query: 21 gatgttggctcgactcactcagaccacgcc 50
          ||||||||||||||||||||||||||||||
Sbjct: 1  gatgttggctcgactcactcagaccacgcc 30



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 72 tctgattgagccgtgccaatatc 94




>54460_sbi-miR171i:pmrd
          Length = 90

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 70  ggcggttctgattgagccgtgccaatatctt 100
           |||| ||||||||||||||||||||||||||
Sbjct: 60  ggcgtttctgattgagccgtgccaatatctt 90




>54455_sbi-miR171d:pmrd
          Length = 154

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 17 ctatgatgttggctcgactcactcagaccac 47
          |||||||||||||||| ||||||||||||||
Sbjct: 17 ctatgatgttggctcggctcactcagaccac 47



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 75  ttctgattgagccgtgccaatatcttagtgctctt 109
           ||||||||||||||||||||||||| ||| |||||
Sbjct: 112 ttctgattgagccgtgccaatatctcagtactctt 146




>48898_osa-miR171d:pmrd
          Length = 135

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 75  ttctgattgagccgtgccaatatct 99
           |||||||||||||||||||||||||
Sbjct: 102 ttctgattgagccgtgccaatatct 126




>48407_bra-miR171e:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 76  tctgattgagccgtgccaatatcttagtgctct 108
           ||||||||||||| |||||||||| ||||||||
Sbjct: 82  tctgattgagccgcgccaatatctcagtgctct 114




>48369_bna-miR171g:pmrd
          Length = 115

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 76  tctgattgagccgtgccaatatcttagtgctct 108
           ||||||||||||| |||||||||| ||||||||
Sbjct: 76  tctgattgagccgcgccaatatctcagtgctct 108




>48368_bna-miR171f:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 76  tctgattgagccgtgccaatatcttagtgctct 108
           ||||||||||||| |||||||||| ||||||||
Sbjct: 82  tctgattgagccgcgccaatatctcagtgctct 114




>48905_osa-miR171n:pmrd
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 75 ttctgattgagccgtgccaatatc 98
          ||||||||||||||||||||||||
Sbjct: 76 ttctgattgagccgtgccaatatc 99



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 21 gatgttggctcgactcactcagac 44
          |||||||||||| |||||||||||
Sbjct: 1  gatgttggctcggctcactcagac 24




>48893_osa-miR170a:pmrd
          Length = 99

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 75 ttctgattgagccgtgccaatatc 98
          ||||||||||||||||||||||||
Sbjct: 76 ttctgattgagccgtgccaatatc 99



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 21 gatgttggctcgactcactcagac 44
          |||||||||||| |||||||||||
Sbjct: 1  gatgttggctcggctcactcagac 24




>55037_zma-miR171j:pmrd
          Length = 129

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  tctgattgagccgtgccaatatc 98
           |||||||||||||||||||||||
Sbjct: 88  tctgattgagccgtgccaatatc 110




>54836_vvi-miR171i:pmrd
          Length = 103

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 67 tctgattgagccgtgccaatatc 89




>54828_vvi-miR171a:pmrd
          Length = 99

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88




>54453_sbi-miR171b:pmrd
          Length = 132

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  tctgattgagccgtgccaatatc 98
           |||||||||||||||||||||||
Sbjct: 91  tctgattgagccgtgccaatatc 113




>52725_ptc-miRf10903-akr:pmrd
          Length = 85

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 58 tctgattgagccgtgccaatatc 80




>51691_ptc-miR171h:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 69 tctgattgagccgtgccaatatc 91




>51690_ptc-miR171g:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 69 tctgattgagccgtgccaatatc 91




>51688_ptc-miR171e:pmrd
          Length = 94

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 63 tctgattgagccgtgccaatatc 85




>49676_osa-miRf10461-akr:pmrd
          Length = 123

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  tctgattgagccgtgccaatatc 98
           |||||||||||||||||||||||
Sbjct: 93  tctgattgagccgtgccaatatc 115




>48904_osa-miR171m:pmrd
          Length = 107

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  tctgattgagccgtgccaatatc 98
           |||||||||||||||||||||||
Sbjct: 85  tctgattgagccgtgccaatatc 107




>48900_osa-miR171f:pmrd
          Length = 127

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  tctgattgagccgtgccaatatc 98
           |||||||||||||||||||||||
Sbjct: 95  tctgattgagccgtgccaatatc 117




>48894_osa-miR170b:pmrd
          Length = 107

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 76  tctgattgagccgtgccaatatc 98
           |||||||||||||||||||||||
Sbjct: 85  tctgattgagccgtgccaatatc 107




>46879_aqc-miR171d:pmrd
          Length = 106

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 78  tgattgagccgtgccaatatctt 100
           |||||||||||||||||||||||
Sbjct: 84  tgattgagccgtgccaatatctt 106




>46877_aqc-miR171b:pmrd
          Length = 77

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 76 tctgattgagccgtgccaatatc 98
          |||||||||||||||||||||||
Sbjct: 53 tctgattgagccgtgccaatatc 75




>46876_aqc-miR171a:pmrd
          Length = 102

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 78  tgattgagccgtgccaatatctt 100
           |||||||||||||||||||||||
Sbjct: 80  tgattgagccgtgccaatatctt 102




>54551_sly-miR171a:pmrd
          Length = 122

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 78  tgattgagccgtgccaatatct 99
           ||||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatct 108




>51692_ptc-miR171i:pmrd
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 78  tgattgagccgtgccaatatct 99
           ||||||||||||||||||||||
Sbjct: 100 tgattgagccgtgccaatatct 121




>48723_mtr-miR171g:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 78  tgattgagccgtgccaatatct 99
           ||||||||||||||||||||||
Sbjct: 80  tgattgagccgtgccaatatct 101




>48722_mtr-miR171d:pmrd
          Length = 105

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 78  tgattgagccgtgccaatatct 99
           ||||||||||||||||||||||
Sbjct: 80  tgattgagccgtgccaatatct 101




>55039_zma-miR171m:pmrd
          Length = 113

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  tgattgagccgtgccaatatc 98
           |||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatc 113




>55036_zma-miR171i:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatc 85




>55033_zma-miR171f:pmrd
          Length = 155

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  tgattgagccgtgccaatatc 98
           |||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135




>55029_zma-miR171b:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82




>55024_zma-miR170m:pmrd
          Length = 115

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  tgattgagccgtgccaatatc 98
           |||||||||||||||||||||
Sbjct: 95  tgattgagccgtgccaatatc 115




>54831_vvi-miR171d:pmrd
          Length = 100

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87




>54830_vvi-miR171c:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90




>54462_sbi-miR171k:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82




>54452_sbi-miR171a:pmrd
          Length = 161

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  tgattgagccgtgccaatatc 98
           |||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatc 142




>51882_ptc-miRf10060-akr:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatc 83




>51685_ptc-miR171b:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91




>51684_ptc-miR171a:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatc 92




>51346_ppe-miR171:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87




>51345_ppe-miR170:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87




>48897_osa-miR171c:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatc 89




>48896_osa-miR171b:pmrd
          Length = 100

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatc 90




>48403_bra-miR171a:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatc 82




>48386_bol-miR171a:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88




>48367_bna-miR171e:pmrd
          Length = 92

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatc 87




>48366_bna-miR171d:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88




>48312_bdi-miR171c:pmrd
          Length = 86

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatc 84




>46979_ath-miR171c:pmrd
          Length = 116

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 78  tgattgagccgtgccaatatc 98
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>46977_ath-miR171a:pmrd
          Length = 123

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 76  tctgattgagccgtgccaatatcttagtgctct 108
           ||||||||||||| |||||||||| ||| ||||
Sbjct: 86  tctgattgagccgcgccaatatctcagtactct 118




>46880_aqc-miR171e:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 78 tgattgagccgtgccaatatc 98
          |||||||||||||||||||||
Sbjct: 21 tgattgagccgtgccaatatc 1