miRNEST 2.0, an integrative microRNA resource :: BLAST
>48657_hvv-miR159b:pmrd
Length = 174
Score = 345 bits (174), Expect = 8e-96
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 20 tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttca 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttca 60
Query: 80 tggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatgat 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatgat 120
Query: 140 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
>54673_tae-miR159a:pmrd
Length = 177
Score = 297 bits (150), Expect = 2e-81
Identities = 172/178 (96%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 19 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60
Query: 79 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
|||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||
Sbjct: 61 atggttcccactatcctatctcca-tagaaaacgaggagagaggcctgtggtttgcatga 119
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 196
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
>54392_sar-miR159:pmrd
Length = 175
Score = 149 bits (75), Expect = 1e-36
Identities = 151/175 (86%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 20 tggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgcttgttc 78
|||||||||||||||||||||||| ||||| | |||||| | || |||||||| ||||
Sbjct: 1 tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 60
Query: 79 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
|||||||||||||||||| |||| || ||| | |||||||||| ||||| ||||||||
Sbjct: 61 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 120
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 193
||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 121 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 175
>48820_osa-miR159b:pmrd
Length = 188
Score = 119 bits (60), Expect = 9e-28
Identities = 156/185 (84%), Gaps = 6/185 (3%)
Strand = Plus / Plus
Query: 19 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 78
||||||||||| || |||||||||| ||| || | ||||||| | |||||||||||||
Sbjct: 10 gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68
Query: 79 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
|||||||||||||| ||||||| || ||| | ||||||||||||||||||||||||
Sbjct: 69 atggttcccactattctatctc-ataggaaaa----gagataggcttgtggtttgcatga 123
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcatct 198
| |||||||| || | ||| ||||||| || ||||||||||||||||||||||||||
Sbjct: 124 ccaaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgcatct 183
Query: 199 tgatc 203
|||||
Sbjct: 184 tgatc 188
>54930_zma-miR159a:pmrd
Length = 246
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 175 tggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||| |||||
Sbjct: 209 tggattgaagggagctctgcatcctgatc 237
Score = 87.7 bits (44), Expect = 3e-18
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||||| | |||||| | || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgttcat 81
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 82 ggttcccactatcctatctc 101
>54628_sof-miR159a:pmrd
Length = 265
Score = 97.6 bits (49), Expect = 3e-21
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 175 tggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256
Score = 79.8 bits (40), Expect = 8e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | |||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>54629_sof-miR159b:pmrd
Length = 266
Score = 93.7 bits (47), Expect = 5e-20
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 175 tggattgaagggagctctgcatc 197
|||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | ||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 80
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>54931_zma-miR159b:pmrd
Length = 221
Score = 85.7 bits (43), Expect = 1e-17
Identities = 78/87 (89%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || || |||| || ||||||||||
Sbjct: 124 gagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgt 182
Query: 174 ttggattgaagggagctctgcatcttg 200
|||||||||||||||||||||||||||
Sbjct: 183 ttggattgaagggagctctgcatcttg 209
>54934_zma-miR159e:pmrd
Length = 203
Score = 81.8 bits (41), Expect = 2e-16
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
||||| |||||||||||||||||| |||||||| || ||| |||| || ||||||||||
Sbjct: 123 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 182
Query: 174 ttggattgaagggagctctgc 194
||||| |||||||||||||||
Sbjct: 183 ttggagtgaagggagctctgc 203
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 66 cagctgcttgttcatggttcccactatcctatctc 100
|||||||| |||||||||||||||| ||| |||||
Sbjct: 48 cagctgctcgttcatggttcccactgtcccatctc 82
>54631_sof-miR159d:pmrd
Length = 265
Score = 81.8 bits (41), Expect = 2e-16
Identities = 77/89 (86%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||| ||||||||||||||||| ||| |||| || || |||| |||| ||||| ||
Sbjct: 168 gagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctt 227
Query: 175 tggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256
Score = 79.8 bits (40), Expect = 8e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | |||||||| || | |||||| ||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>51338_pgl-miR159:pmrd
Length = 226
Score = 77.8 bits (39), Expect = 3e-15
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
||||||||||||||| |||||||| |||||||| || || |||| |||| ||||| ||
Sbjct: 148 gagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 207
Query: 175 tggattgaagggagctctg 193
|||||||||||||||||||
Sbjct: 208 tggattgaagggagctctg 226
Score = 63.9 bits (32), Expect = 5e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 57 gggtttgtgcagctgcttgttcatggttcccactatcctatctc 100
||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 38 gggttggtacagctgctcgttcatggttcccactatcctatctc 81
>48656_hvv-miR159a:pmrd
Length = 303
Score = 77.8 bits (39), Expect = 3e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatcttgatctattacta 211
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatcttgatctattacta 39
>54632_sof-miR159e:pmrd
Length = 264
Score = 71.9 bits (36), Expect = 2e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 21 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
|||||||||||||||||||||||||| | | ||||||| || | |||||| ||||||
Sbjct: 21 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 79
Query: 81 ggttcccactatcctatctc 100
||||||||||||||||||||
Sbjct: 80 ggttcccactatcctatctc 99
Score = 67.9 bits (34), Expect = 3e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
|||||||||||||||||||||||| ||| |||| || || |||| |||| ||||| ||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 175 tggattgaagggagctct 192
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
>54937_zma-miR159m:pmrd
Length = 457
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||||| |||||
Sbjct: 1 tttggattgaagggagctctgcatcctgatc 31
>54653_spr-miR159:pmrd
Length = 392
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatcttgatc 203
||||||||||||||||||||||||| |||||
Sbjct: 1 tttggattgaagggagctctgcatcctgatc 31
>48819_osa-miR159a:pmrd
Length = 272
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatctt 199
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatctt 199
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>54674_tae-miR159b:pmrd
Length = 255
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatct 198
||||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>48701_mtr-miR159c:pmrd
Length = 44
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatcttg 200
|||||||||||||||||||| |||||||
Sbjct: 1 tttggattgaagggagctctacatcttg 28
>48728_mtr-miR319b:pmrd
Length = 42
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 174 ttggattgaagggagctctgcatcttg 200
||||||||||||||||||| |||||||
Sbjct: 1 ttggattgaagggagctctacatcttg 27
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctgcatct 198
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctctg 193
|||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctctg 249
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>54378_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48699_mtr-miR159a:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48539_gma-miR159a:pmrd
Length = 214
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 gtttggattgaagggagctc 191
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>46931_ath-miR159a:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
