miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48657_hvv-miR159b:pmrd
          Length = 174

 Score =  345 bits (174), Expect = 8e-96
 Identities = 174/174 (100%)
 Strand = Plus / Plus

                                                                       
Query: 20  tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttca 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttca 60

                                                                       
Query: 80  tggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatgat 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatgat 120

                                                                 
Query: 140 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 193
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174




>54673_tae-miR159a:pmrd
          Length = 177

 Score =  297 bits (150), Expect = 2e-81
 Identities = 172/178 (96%), Gaps = 1/178 (0%)
 Strand = Plus / Plus

                                                                       
Query: 19  gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 78
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1   gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60

                                                                       
Query: 79  atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
           |||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||
Sbjct: 61  atggttcccactatcctatctcca-tagaaaacgaggagagaggcctgtggtttgcatga 119

                                                                     
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 196
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 ccgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177




>54392_sar-miR159:pmrd
          Length = 175

 Score =  149 bits (75), Expect = 1e-36
 Identities = 151/175 (86%), Gaps = 1/175 (0%)
 Strand = Plus / Plus

                                                                       
Query: 20  tggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgcttgttc 78
           |||||||||||||||||||||||| |||||  |  |||||| | || |||||||| ||||
Sbjct: 1   tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 60

                                                                       
Query: 79  atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
           |||||||||||||||||| |||| || |||  |  |||||||||| ||||| ||||||||
Sbjct: 61  atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 120

                                                                  
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 193
            ||||||||||| |||  ||||||||| ||||| |||||||||||||||||||||
Sbjct: 121 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 175




>48820_osa-miR159b:pmrd
          Length = 188

 Score =  119 bits (60), Expect = 9e-28
 Identities = 156/185 (84%), Gaps = 6/185 (3%)
 Strand = Plus / Plus

                                                                       
Query: 19  gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttc 78
           ||||||||||| || |||||||||| ||| || | |||||||   | |||||||||||||
Sbjct: 10  gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68

                                                                       
Query: 79  atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 138
           |||||||||||||| ||||||| ||  ||| |    ||||||||||||||||||||||||
Sbjct: 69  atggttcccactattctatctc-ataggaaaa----gagataggcttgtggtttgcatga 123

                                                                       
Query: 139 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcatct 198
            | ||||||||  || |  ||| ||||||| || ||||||||||||||||||||||||||
Sbjct: 124 ccaaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgcatct 183

                
Query: 199 tgatc 203
           |||||
Sbjct: 184 tgatc 188




>54930_zma-miR159a:pmrd
          Length = 246

 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
           |||||||||||||||||||||||| |||||||| ||  ||  |||| |||| ||||| ||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208

                                        
Query: 175 tggattgaagggagctctgcatcttgatc 203
           ||||||||||||||||||||||| |||||
Sbjct: 209 tggattgaagggagctctgcatcctgatc 237



 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                       
Query: 21  ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
           ||||||||||||||||||||||||||||   | |||||| | || | |||||| ||||||
Sbjct: 22  ggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgttcat 81

                               
Query: 81  ggttcccactatcctatctc 100
           ||||||||||||||||||||
Sbjct: 82  ggttcccactatcctatctc 101




>54628_sof-miR159a:pmrd
          Length = 265

 Score = 97.6 bits (49), Expect = 3e-21
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
           |||||||||||||||||||||||| |||||||| ||  ||  |||| |||| ||||| ||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227

                                        
Query: 175 tggattgaagggagctctgcatcttgatc 203
           ||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256



 Score = 79.8 bits (40), Expect = 8e-16
 Identities = 71/80 (88%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
           |||||||||||||||||||||||||| |   | |||||||| || | |||||| ||||||
Sbjct: 22  ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80

                               
Query: 81  ggttcccactatcctatctc 100
           ||||||||||||||||||||
Sbjct: 81  ggttcccactatcctatctc 100




>54629_sof-miR159b:pmrd
          Length = 266

 Score = 93.7 bits (47), Expect = 5e-20
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
           |||||||||||||||||||||||| |||||||| ||  ||  |||| |||| ||||| ||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228

                                  
Query: 175 tggattgaagggagctctgcatc 197
           |||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251



 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
           |||||||||||||||||||||||||| |   | |||||||  || | |||||| ||||||
Sbjct: 22  ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 80

                               
Query: 81  ggttcccactatcctatctc 100
           ||||||||||||||||||||
Sbjct: 81  ggttcccactatcctatctc 100




>54931_zma-miR159b:pmrd
          Length = 221

 Score = 85.7 bits (43), Expect = 1e-17
 Identities = 78/87 (89%), Gaps = 2/87 (2%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
           ||||| |||||||||||||||||| |||||||| ||  ||  |||| || ||||||||||
Sbjct: 124 gagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgt 182

                                      
Query: 174 ttggattgaagggagctctgcatcttg 200
           |||||||||||||||||||||||||||
Sbjct: 183 ttggattgaagggagctctgcatcttg 209




>54934_zma-miR159e:pmrd
          Length = 203

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 72/81 (88%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccct-cgctgaccgctgt 173
           ||||| |||||||||||||||||| |||||||| || |||  |||| || ||||||||||
Sbjct: 123 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 182

                                
Query: 174 ttggattgaagggagctctgc 194
           ||||| |||||||||||||||
Sbjct: 183 ttggagtgaagggagctctgc 203



 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 66  cagctgcttgttcatggttcccactatcctatctc 100
           |||||||| |||||||||||||||| ||| |||||
Sbjct: 48  cagctgctcgttcatggttcccactgtcccatctc 82




>54631_sof-miR159d:pmrd
          Length = 265

 Score = 81.8 bits (41), Expect = 2e-16
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
           |||||| ||||||||||||||||| ||| |||| ||  ||  |||| |||| ||||| ||
Sbjct: 168 gagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctt 227

                                        
Query: 175 tggattgaagggagctctgcatcttgatc 203
           ||||||||||||||||||||||| |||||
Sbjct: 228 tggattgaagggagctctgcatcctgatc 256



 Score = 79.8 bits (40), Expect = 8e-16
 Identities = 71/80 (88%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
           |||||||||||||||||||||||||| |   | |||||||| || | |||||| ||||||
Sbjct: 22  ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80

                               
Query: 81  ggttcccactatcctatctc 100
           ||||||||||||||||||||
Sbjct: 81  ggttcccactatcctatctc 100




>51338_pgl-miR159:pmrd
          Length = 226

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 69/79 (87%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
           ||||||||||||||| |||||||| |||||||| ||  ||  |||| |||| ||||| ||
Sbjct: 148 gagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 207

                              
Query: 175 tggattgaagggagctctg 193
           |||||||||||||||||||
Sbjct: 208 tggattgaagggagctctg 226



 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 57  gggtttgtgcagctgcttgttcatggttcccactatcctatctc 100
           ||||| || |||||||| ||||||||||||||||||||||||||
Sbjct: 38  gggttggtacagctgctcgttcatggttcccactatcctatctc 81




>48656_hvv-miR159a:pmrd
          Length = 303

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 173 tttggattgaagggagctctgcatcttgatctattacta 211
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tttggattgaagggagctctgcatcttgatctattacta 39




>54632_sof-miR159e:pmrd
          Length = 264

 Score = 71.9 bits (36), Expect = 2e-13
 Identities = 70/80 (87%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                       
Query: 21  ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 80
           |||||||||||||||||||||||||| |   | |||||||  || | |||||| ||||||
Sbjct: 21  ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 79

                               
Query: 81  ggttcccactatcctatctc 100
           ||||||||||||||||||||
Sbjct: 80  ggttcccactatcctatctc 99



 Score = 67.9 bits (34), Expect = 3e-12
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                       
Query: 115 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 174
           |||||||||||||||||||||||| ||| |||| ||  ||  |||| |||| ||||| ||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226

                             
Query: 175 tggattgaagggagctct 192
           ||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244




>54937_zma-miR159m:pmrd
          Length = 457

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 173 tttggattgaagggagctctgcatcttgatc 203
           ||||||||||||||||||||||||| |||||
Sbjct: 1   tttggattgaagggagctctgcatcctgatc 31




>54653_spr-miR159:pmrd
          Length = 392

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 173 tttggattgaagggagctctgcatcttgatc 203
           ||||||||||||||||||||||||| |||||
Sbjct: 1   tttggattgaagggagctctgcatcctgatc 31




>48819_osa-miR159a:pmrd
          Length = 272

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 173 tttggattgaagggagctctgcatctt 199
           |||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268




>48796_oru-miR159:pmrd
          Length = 274

 Score = 54.0 bits (27), Expect = 4e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 173 tttggattgaagggagctctgcatctt 199
           |||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268




>54674_tae-miR159b:pmrd
          Length = 255

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 173 tttggattgaagggagctctgcatct 198
           ||||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255




>48701_mtr-miR159c:pmrd
          Length = 44

 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 173 tttggattgaagggagctctgcatcttg 200
           |||||||||||||||||||| |||||||
Sbjct: 1   tttggattgaagggagctctacatcttg 28




>48728_mtr-miR319b:pmrd
          Length = 42

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 174 ttggattgaagggagctctgcatcttg 200
           ||||||||||||||||||| |||||||
Sbjct: 1   ttggattgaagggagctctacatcttg 27




>54777_vvi-miR159c:pmrd
          Length = 190

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 171 tgtttggattgaagggagctct 192
           ||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179




>46932_ath-miR159b:pmrd
          Length = 196

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 173 tttggattgaagggagctctgcatct 198
           |||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193




>48825_osa-miR159m:pmrd
          Length = 249

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 173 tttggattgaagggagctctg 193
           |||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctctg 249




>54540_sly-miR159:pmrd
          Length = 177

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176




>54378_pvu-miR159:pmrd
          Length = 174

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172




>54377_pvu-miR159:pmrd
          Length = 174

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172




>52093_ptc-miRf10271-akr:pmrd
          Length = 174

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168




>51604_ptc-miR159c:pmrd
          Length = 183

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173




>51603_ptc-miR159b:pmrd
          Length = 187

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177




>51602_ptc-miR159a:pmrd
          Length = 183

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173




>48699_mtr-miR159a:pmrd
          Length = 168

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167




>48686_ltu-miR159:pmrd
          Length = 345

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 1   tttggattgaagggagctct 20




>48539_gma-miR159a:pmrd
          Length = 214

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194




>48395_bra-miR159a:pmrd
          Length = 185

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182




>48339_bna-miR159:pmrd
          Length = 183

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180




>46933_ath-miR159c:pmrd
          Length = 225

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 172 gtttggattgaagggagctc 191
           ||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213




>46931_ath-miR159a:pmrd
          Length = 184

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 tttggattgaagggagctct 192
           ||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182