miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 67  tagtacaaagttgtgacacttattttgggacggagggagta 107
           ||||| ||||||| | |||||||||||||||||||||||||
Sbjct: 40  tagtataaagttgagtcacttattttgggacggagggagta 80



 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                          
Query: 10 atactccctccgttccaaaataagtgactcaa 41
          ||||||||||||| ||||||||||||||||||
Sbjct: 81 atactccctccgtcccaaaataagtgactcaa 50



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 73  aaagttgtgacacttattttgggacggagggagta 107
           ||||||| | |||||||||||||||||||||||||
Sbjct: 40  aaagttgagtcacttattttgggacggagggagta 6



 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 11 tactccctccgttccaaaataagtgactcaa 41
          |||||||||||| ||||||||||||||||||
Sbjct: 6  tactccctccgtcccaaaataagtgactcaa 36




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 83  cacttattttgggacggagggagta 107
           |||||||||||||||||||||||||
Sbjct: 25  cacttattttgggacggagggagta 1



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 tactccctccgttccaaaataagtg 35
          |||||||||||| ||||||||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 84  acttattttgggacggagggagta 107
           ||||||||||||||||||||||||
Sbjct: 72  acttattttgggacggagggagta 95



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgttccaaaataagt 34
          |||||||||||| |||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 84  acttattttgggacggagggagta 107
           ||||||||||||||||||||||||
Sbjct: 72  acttattttgggacggagggagta 95



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgttccaaaataagt 34
          |||||||||||| |||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 84  acttattttgggacggagggagta 107
           ||||||||||||||||||||||||
Sbjct: 30  acttattttgggacggagggagta 7



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccgttccaaaataagt 34
          |||||||||||| |||||||||||
Sbjct: 7  tactccctccgtcccaaaataagt 30




>49314_osa-miRf10099-akr:pmrd
          Length = 144

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 87  tattttgggacggagggagtacta 110
           ||||||||||||||||||||||||
Sbjct: 34  tattttgggacggagggagtacta 11




>46908_ata-miR1120:pmrd
          Length = 85

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 56/64 (87%), Gaps = 2/64 (3%)
 Strand = Plus / Plus

                                                                      
Query: 17 ctccgttccaaaataagtgactcaagcttagtac-aactttgtactagagctagtacaaa 75
          |||||||||||||||  |||||||| ||| |||| || ||||||||| || |||||||||
Sbjct: 1  ctccgttccaaaatagatgactcaa-ctttgtactaattttgtactatagttagtacaaa 59

              
Query: 76 gttg 79
          ||||
Sbjct: 60 gttg 63




>49154_osa-miR1862c:pmrd
          Length = 89

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 84  acttattttgggacggagggagt 106
           |||||||||||||||||||||||
Sbjct: 23  acttattttgggacggagggagt 1