miRNEST 2.0, an integrative microRNA resource :: BLAST
>48371_bna-miR390b:pmrd
Length = 105
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||||
Sbjct: 6 gaagaatctgtaaagctcaggagggatagcgcca 39
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||| ||||||||||||||||| || |||||
Sbjct: 67 gcgctgtccatcctgagtttcattggctcttc 98
>47212_ath-miRf10112-akr:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||||
Sbjct: 6 gaagaatctgtaaagctcaggagggatagcgcca 39
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||| || |||||
Sbjct: 69 gcgctatccatcctgagtttcattggctcttc 100
>46995_ath-miR390a:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 14 gaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||||||||||||||||||||||||
Sbjct: 6 gaagaatctgtaaagctcaggagggatagcgcca 39
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||| || |||||
Sbjct: 69 gcgctatccatcctgagtttcattggctcttc 100
>48499_ghr-miR390b:pmrd
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 tggaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||| ||||||||||||||||||||||
Sbjct: 4 tggaagaatctgttaagctcaggagggatagcgcca 39
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 tagcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||||| ||||||||
Sbjct: 92 tagcgctatccatcctgagtttcatcggttcttc 125
>48498_ghr-miR390a:pmrd
Length = 124
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 12 tggaagaatctgtaaagctcaggagggatagcgcca 47
||||||||||||| ||||||||||||||||||||||
Sbjct: 1 tggaagaatctgttaagctcaggagggatagcgcca 36
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 107 tagcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||||||||| ||||||||
Sbjct: 89 tagcgctatccatcctgagtttcatcggttcttc 122
>54848_vvi-miR390:pmrd
Length = 140
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||| ||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
|||||||| ||||||||||||| |||||||||
Sbjct: 109 gcgctatctatcctgagtttcacgggttcttc 140
>52711_ptc-miRf10889-akr:pmrd
Length = 127
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||| ||||||||||||||||||||||
Sbjct: 4 agaatctgttaagctcaggagggatagcgcca 35
>51716_ptc-miR390a:pmrd
Length = 119
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||| ||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
>48575_gma-miR390b:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagc 43
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>48500_ghr-miR390c:pmrd
Length = 114
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcca 47
||||||||| ||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcca 32
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 107 tagcgctatccatcctgagtttcatgggtt 136
||||||||||||||||||||||||| ||||
Sbjct: 85 tagcgctatccatcctgagtttcatcggtt 114
>51719_ptc-miR390d:pmrd
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcc 46
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagttt 128
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>51717_ptc-miR390b:pmrd
Length = 106
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 agaatctgtaaagctcaggagggatagcgcc 46
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 95 tttgattttctgtagcgctatccatcctgagtttcat 131
||||||| || || |||||||||||||||||||||||
Sbjct: 65 tttgattctcagtggcgctatccatcctgagtttcat 101
>48372_bna-miR390c:pmrd
Length = 128
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 ctgtaaagctcaggagggatagcgcca 47
|||||||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgcca 44
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||| ||||| ||||||
Sbjct: 85 gcgctatccatcctgagttccatggcttcttc 116
>48370_bna-miR390a:pmrd
Length = 144
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 21 ctgtaaagctcaggagggatagcgcca 47
|||||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgcca 54
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||| |||| ||||||
Sbjct: 95 gcgctatccatcctgagttctatggcttcttc 126
>51718_ptc-miR390c:pmrd
Length = 123
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 atctgtaaagctcaggagggatagcgcca 47
|||||| ||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgcca 32
>46996_ath-miR390b:pmrd
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 taaagctcaggagggatagcgcca 47
||||||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagcgcca 36
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagtttcatgggttcttc 140
||||||||||||||||||| ||| | ||||||
Sbjct: 87 gcgctatccatcctgagttccatagcttcttc 118
>48916_osa-miR390:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgccacgaaa 52
||||||||||||||||||||| |||||
Sbjct: 19 aagctcaggagggatagcgcctcgaaa 45
>51391_ppt-miR390a:pmrd
Length = 137
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcca 47
||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgcca 37
>48729_mtr-miR390:pmrd
Length = 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcca 47
||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcca 22
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 96 ttgattttctgtagcgctatccatcctgagttt 128
||||| |||| | ||||||||||||||||||||
Sbjct: 58 ttgatcttctcttgcgctatccatcctgagttt 90
>47211_ath-miRf10111-akr:pmrd
Length = 71
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcca 47
||||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcca 22
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagttt 128
||||||||||||||||||||
Sbjct: 52 gcgctatccatcctgagttt 71
>55055_zma-miR390:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 1 aagctcaggagggatagcgcc 21
>53138_ptc-miRf11316-akr:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 4 aagctcaggagggatagcgcc 24
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 109 gcgctatccatcctgagttt 128
||||||||||||||||||||
Sbjct: 72 gcgctatccatcctgagttt 91
>51392_ppt-miR390b:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 aagctcaggagggatagcgcc 46
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>51394_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 27 agctcaggagggatagcgcc 46
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
>51393_ppt-miR390c:pmrd
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 27 agctcaggagggatagcgcc 46
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
