miRNEST 2.0, an integrative microRNA resource :: BLAST
>54701_tae-miR1126:pmrd
Length = 164
Score = 85.7 bits (43), Expect = 1e-17
Identities = 71/79 (89%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 92 tagattcattcattttgctccgtatgtagccctctagtgaaatgtctaaaaagacttata 151
|||||||||| |||||||||||||||||| || ||||| ||| |||| |||||||||||
Sbjct: 79 tagattcatttattttgctccgtatgtagtcca-tagtggaatttctataaagacttata 21
Query: 152 tttaggaacggagggagta 170
||||||||||||| |||||
Sbjct: 20 tttaggaacggagagagta 2
Score = 60.0 bits (30), Expect = 6e-10
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 126 tagtgaaatgtctaaaaagacttatatttaggaacggagggagtat 171
|||| |||| |||| |||||||||||||||| ||||||||||||||
Sbjct: 119 tagtaaaatctctacaaagacttatatttagaaacggagggagtat 164
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataagtcttt 35
||||| ||||||||||||||||||||||||
Sbjct: 2 tactctctccgttcctaaatataagtcttt 31
>54697_tae-miR1122:pmrd
Length = 295
Score = 77.8 bits (39), Expect = 2e-15
Identities = 94/111 (84%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 56 actacatgcggatgtatatagacatactttaaaatatagattcattcattttgctccgta 115
||||||| |||||||||||||||||| |||| | | |||||||| ||||||| || ||||
Sbjct: 179 actacatacggatgtatatagacatattttagagtgtagattcactcattttacttcgta 238
Query: 116 tgtagccctctagtgaaatgtctaaaaagacttatatttaggaacggaggg 166
||||| || ||||| ||| ||||| ||| | ||||||||||||| |||||
Sbjct: 239 tgtagtcc-atagtggaatctctaagaaggcatatatttaggaacagaggg 288
>50531_osa-miRf11316-akr:pmrd
Length = 82
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 146 cttatatttaggaacggagggagta 170
|||||||||||||||||||||||||
Sbjct: 30 cttatatttaggaacggagggagta 6
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||||||||||||||||
Sbjct: 6 tactccctccgttcctaaatataag 30
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 cttatatttaggaacggagggagtat 171
||||||||||||||| ||||||||||
Sbjct: 53 cttatatttaggaacagagggagtat 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
||||||||| |||||||||||||||
Sbjct: 77 tactccctctgttcctaaatataag 53
>50827_osa-miRf11612-akr:pmrd
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataagt 31
|||||||||||| |||||||||||||
Sbjct: 126 tactccctccgtccctaaatataagt 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 145 acttatatttaggaacggagggagta 170
||||||||||||| ||||||||||||
Sbjct: 101 acttatatttagggacggagggagta 126
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 146 cttatatttaggaacggagggagtat 171
|||||||||||| |||||||||||||
Sbjct: 26 cttatatttagggacggagggagtat 1
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 2 tactccctccgtccctaaatataag 26
>51023_osa-miRf11808-akr:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttcctaaatataag 30
|||||||||||| ||||||||||||
Sbjct: 113 tactccctccgtccctaaatataag 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 146 cttatatttaggaacggagggagta 170
|||||||||||| ||||||||||||
Sbjct: 89 cttatatttagggacggagggagta 113
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 147 ttatatttaggaacggagggagta 170
||||||||||| ||||||||||||
Sbjct: 28 ttatatttagggacggagggagta 5
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataa 29
|||||||||||| |||||||||||
Sbjct: 5 tactccctccgtccctaaatataa 28
>50427_osa-miRf11212-akr:pmrd
Length = 152
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 150 tatttaggaacggagggagtatat 173
|||||||| |||||||||||||||
Sbjct: 32 tatttagggacggagggagtatat 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 150 tatttaggaacggagggagtatat 173
|||||||| |||||||||||||||
Sbjct: 121 tatttagggacggagggagtatat 144
>49950_osa-miRf10735-akr:pmrd
Length = 131
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 147 ttatatttaggaacggagggagta 170
||||||||||| ||||||||||||
Sbjct: 30 ttatatttagggacggagggagta 7
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 tactccctccgttcctaaatataa 29
|||||||||||| |||||||||||
Sbjct: 7 tactccctccgtccctaaatataa 30
