miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 65.9 bits (33), Expect = 6e-12
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                       
Query: 17 tactccctccgtcccataatataagagcgtttttgacactacact 61
          ||||||||||||| ||||||||||||  |||||||||||||||||
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacactacact 55



 Score = 61.9 bits (31), Expect = 9e-11
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                 
Query: 16 gtactccctccgtcccataatataagagcgtttttgaca 54
          ||||||||||||||||||||||||||| | |||||||||
Sbjct: 17 gtactccctccgtcccataatataagaacatttttgaca 55




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 16 gtactccctccgtcccataatataag 41
          ||||||||||||||||||||||||||
Sbjct: 8  gtactccctccgtcccataatataag 33




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 16 gtactccctccgtcccataatataag 41
          ||||||||||||||||||||||||||
Sbjct: 8  gtactccctccgtcccataatataag 33




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 52.0 bits (26), Expect = 9e-08
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 16  gtactccctccgtcccataatataag 41
           ||||||||||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataatataag 103




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 17 tactccctccgtcccataatataag 41
          |||||||||||||||||||||||||
Sbjct: 10 tactccctccgtcccataatataag 34



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 17  tactccctccgtcccataatataag 41
           |||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataag 89




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 17 tactccctccgtcccataatataag 41
          |||||||||||||||||||||||||
Sbjct: 97 tactccctccgtcccataatataag 73




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 17 tactccctccgtcccataatataag 41
          |||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccataatataag 31



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 17  tactccctccgtcccataatataag 41
           |||||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccataatataag 97




>50275_osa-miRf11060-akr:pmrd
          Length = 166

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 16 gtactccctccgtcccataatataag 41
          |||||||||||||||||| |||||||
Sbjct: 32 gtactccctccgtcccatgatataag 7




>50274_osa-miRf11059-akr:pmrd
          Length = 172

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 16 gtactccctccgtcccataatataag 41
          |||||||||||||||||| |||||||
Sbjct: 35 gtactccctccgtcccatgatataag 10




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 16 gtactccctccgtcccataatataag 41
          ||||||||||||||||| ||||||||
Sbjct: 93 gtactccctccgtcccaaaatataag 68




>49621_osa-miRf10406-akr:pmrd
          Length = 115

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 15  tgtactccctccgtcccataat 36
           ||||||||||||||||||||||
Sbjct: 108 tgtactccctccgtcccataat 87




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 17 tactccctccgtcccataatat 38
          ||||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataatat 33



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  tactccctccgtcccataat 36
           ||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 22 cctccgtcccataatataagag 43
          ||||||||||||||||||||||
Sbjct: 1  cctccgtcccataatataagag 22



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 22  cctccgtcccataatataag 41
           ||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataag 94