miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                       
Query: 23  tctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgttcttatat 82
           ||||||||||||||||| |   |||| || | ||||||||||||||||| | ||||||||
Sbjct: 8   tctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttatat 67

                             
Query: 83  tagtttacgaagggagta 100
           ||||||||  ||||||||
Sbjct: 68  tagtttacagagggagta 85



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 60 tagtgatctaaacgttcttatattagtttac 90
          |||||||||||| | ||||||||||||||||
Sbjct: 41 tagtgatctaaaaggtcttatattagtttac 11




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 67.9 bits (34), Expect = 2e-12
 Identities = 76/90 (84%)
 Strand = Plus / Plus

                                                                       
Query: 16  tactccatctgtaaactaatataaaagtgtttacataagtaaagtagtgatctaaacgtt 75
           |||||| ||||||||  ||||| | |||||||| || | | ||||||||||||||||| |
Sbjct: 9   tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68

                                         
Query: 76  cttatattagtttacgaagggagtagtgta 105
           ||||||||  |||||| |||||||| ||||
Sbjct: 69  cttatatttctttacggagggagtactgta 98




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 56.0 bits (28), Expect = 6e-09
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 57  aagtagtgatctaaacgttcttatattagtttacgaagggagta 100
           ||||||||||||||| | ||||||||||||||||  ||||||||
Sbjct: 41  aagtagtgatctaaaaggtcttatattagtttacagagggagta 84



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                         
Query: 60 tagtgatctaaacgttcttatattagtttac 90
          |||||||||||| | ||||||||||||||||
Sbjct: 41 tagtgatctaaaaggtcttatattagtttac 11



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 16 tactccatctgtaaactaatataa 39
          |||||| |||||||||||||||||
Sbjct: 84 tactccctctgtaaactaatataa 61




>48304_ave-miR1120:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 60  tagtgatctaaacgttcttatattagtttacgaagggagta 100
           |||||||||||||| |||||||||  |||||  ||||||||
Sbjct: 44  tagtgatctaaacgctcttatatttctttacagagggagta 4