miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 61 tcttatattatgggacggagggag 84
          ||||||||||||||||||||||||
Sbjct: 43 tcttatattatgggacggagggag 20



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          |||||||||| |||||||||||||
Sbjct: 18 tactccctccgtcccataatataa 41



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 61 tcttatattatgggacggagggag 84
          |||||||||||| |||||||||||
Sbjct: 74 tcttatattatgagacggagggag 97




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 62 cttatattatgggacggagggag 84
          |||||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagggag 11



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          |||||||||| |||||||||||||
Sbjct: 9  tactccctccgtcccataatataa 32




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 62 cttatattatgggacggagggag 84
          |||||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagggag 11



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          |||||||||| |||||||||||||
Sbjct: 9  tactccctccgtcccataatataa 32




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 62 cttatattatgggacggagggag 84
          |||||||||||||||||||||||
Sbjct: 34 cttatattatgggacggagggag 12



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  cttatattatgggacggagggag 84
           |||||||||||||||||||||||
Sbjct: 89  cttatattatgggacggagggag 111



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 9   tatactccctccatcccataatataa 34
           |||||||||||| |||||||||||||
Sbjct: 115 tatactccctccgtcccataatataa 90



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          |||||||||| |||||||||||||
Sbjct: 10 tactccctccgtcccataatataa 33




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 62 cttatattatgggacggagggag 84
          |||||||||||||||||||||||
Sbjct: 73 cttatattatgggacggagggag 95



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                    
Query: 9  tatactccctccatcccataatataa 34
          |||||||||||| |||||||||||||
Sbjct: 99 tatactccctccgtcccataatataa 74




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                 
Query: 62 cttatattatgggacggagggag 84
          |||||||||||||||||||||||
Sbjct: 31 cttatattatgggacggagggag 9



 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  cttatattatgggacggagggag 84
           |||||||||||||||||||||||
Sbjct: 97  cttatattatgggacggagggag 119



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          |||||||||| |||||||||||||
Sbjct: 7  tactccctccgtcccataatataa 30



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  tactccctccatcccataatataa 34
           |||||||||| |||||||||||||
Sbjct: 121 tactccctccgtcccataatataa 98




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 62  cttatattatgggacggagggag 84
           |||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggag 125



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccatcccataatataa 34
          ||||| ||||||||||||||||||
Sbjct: 15 tactctctccatcccataatataa 38



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  tactccctccatcccataatataa 34
           |||||||||| |||||||||||||
Sbjct: 127 tactccctccgtcccataatataa 104




>49126_osa-miR1442:pmrd
          Length = 185

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 62  cttatattatgggacggagggaggagtata 91
           |||||||||||||||||| |||| ||||||
Sbjct: 141 cttatattatgggacggatggagtagtata 112




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 60 ctcttatattatgggacggagg 81
          ||||||||||||||||||||||
Sbjct: 22 ctcttatattatgggacggagg 1



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  cttatattatgggacggagg 81
           ||||||||||||||||||||
Sbjct: 94  cttatattatgggacggagg 113




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 65 atattatgggacggagggag 84
          ||||||||||||||||||||
Sbjct: 33 atattatgggacggagggag 14




>49071_osa-miR818e:pmrd
          Length = 225

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 62  cttatattatgggacggagg 81
           ||||||||||||||||||||
Sbjct: 206 cttatattatgggacggagg 225