miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 39/40 (97%), Gaps = 1/40 (2%)
 Strand = Plus / Minus

                                                  
Query: 46 tccctccgtcccaaa-taagtgactcaactttatactaaa 84
          ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 77 tccctccgtcccaaaataagtgactcaactttatactaaa 38



 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 32/33 (96%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                           
Query: 46 tccctccgtcccaaa-taagtgactcaacttta 77
          ||||||||||||||| |||||||||||||||||
Sbjct: 9  tccctccgtcccaaaataagtgactcaacttta 41




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 127 agtagtgagctaaacgctcttatatttctttatgaagggagt 168
           |||||||| ||||||||||||||||||||||| | |||||||
Sbjct: 51  agtagtgatctaaacgctcttatatttctttacggagggagt 92




>48304_ave-miR1120:pmrd
          Length = 85

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 129 tagtgagctaaacgctcttatatttcttta 158
           |||||| |||||||||||||||||||||||
Sbjct: 44  tagtgatctaaacgctcttatatttcttta 15



 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 136 ctaaacgctcttatatttcttta 158
           |||||||||||||||||||||||
Sbjct: 49  ctaaacgctcttatatttcttta 71




>54753_tae-miR2033b:pmrd
          Length = 72

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 140 acgctcttatatttctttatgaagggagt 168
           ||||||||||||||||||||| |||||||
Sbjct: 30  acgctcttatatttctttatggagggagt 2



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 129 tagtgagctaaacgctcttatatttcttta 158
           |||||| |||||| ||||||||||||||||
Sbjct: 32  tagtgatctaaacactcttatatttcttta 61




>48325_bdi-miR2502:pmrd
          Length = 94

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 106 ttattttgagacggagggagta 127
           ||||||||||||||||||||||
Sbjct: 26  ttattttgagacggagggagta 5




>49784_osa-miRf10569-akr:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 atttattttgagacggagggagta 127
           |||||||||| |||||||||||||
Sbjct: 34  atttattttgggacggagggagta 11




>49783_osa-miRf10568-akr:pmrd
          Length = 132

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 104 atttattttgagacggagggagta 127
           |||||||||| |||||||||||||
Sbjct: 34  atttattttgggacggagggagta 11