miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48325_bdi-miR2502:pmrd
          Length = 94

 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 10 catgtactccctccgtctcaaaataactg 38
          |||||||||||||||||||||||||||||
Sbjct: 1  catgtactccctccgtctcaaaataactg 29




>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                   
Query: 14 tactccctccgtctcaaaataactgtctcaactttgtacta 54
          ||||||||||||| |||||||| || ||||||||| |||||
Sbjct: 80 tactccctccgtcccaaaataagtgactcaactttatacta 40



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 14 tactccctccgtctcaaaataactgtctcaacttt 48
          ||||||||||||| |||||||| || |||||||||
Sbjct: 6  tactccctccgtcccaaaataagtgactcaacttt 40



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 80  ttgagacacttattttggaacggagggagta 110
           ||||| |||||||||||| ||||||||||||
Sbjct: 36  ttgagtcacttattttgggacggagggagta 6



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 80  ttgagacacttattttggaacggagggagta 110
           ||||| |||||||||||| ||||||||||||
Sbjct: 50  ttgagtcacttattttgggacggagggagta 80




>46908_ata-miR1120:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 57/66 (86%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                       
Query: 40  ctcaactttgtactagctctagtataaaatt-gtactaagcttgagacacttattttgga 98
           ||||||||||||||| || ||||| |||||| |||| ||| ||||| ||  |||||||||
Sbjct: 65  ctcaactttgtactaactatagtacaaaattagtacaaag-ttgagtcatctattttgga 7

                 
Query: 99  acggag 104
           ||||||
Sbjct: 6   acggag 1




>54712_tae-miR1137:pmrd
          Length = 148

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 91  attttggaacggagggagtac 111
           |||||||||||||||||||||
Sbjct: 47  attttggaacggagggagtac 27




>50995_osa-miRf11780-akr:pmrd
          Length = 116

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 90  tattttggaacggagggagta 110
           |||||||||||||||||||||
Sbjct: 95  tattttggaacggagggagta 115




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 86  cacttattttggaacggagggagta 110
           |||||||||||| ||||||||||||
Sbjct: 25  cacttattttgggacggagggagta 1