miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 70/82 (85%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||||| | |||||| ||||| |||| | ||||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26

                                
Query: 66 ttaatattagttgacagaggga 87
           | ||||||||| |||||||||
Sbjct: 25 cttatattagtttacagaggga 4



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgcttta 68
          |||||| |||||||||||||||| | |||||| |||||   || | ||||||| | | | 
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63

                              
Query: 69 atattagttgacagagggag 88
          ||||||||| ||||||||||
Sbjct: 64 atattagtttacagagggag 83




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 61.9 bits (31), Expect = 7e-11
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          |||||||||||||||  ||||||||||| |||||| ||||| || | | |||||||| ||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacact 34

                                 
Query: 66 ttaatattagttgacagagggag 88
           |||||||  || ||||||||||
Sbjct: 33 ctaatatttctttacagagggag 11




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 69/82 (84%), Gaps = 1/82 (1%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctccgtaaactaatataagagcatttagaacactattttaataatctaaacgct 65
          ||||||||| |||||||||||||||| | |||||| |||||  ||| | ||||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcacta-cttagtgatctaaaaggt 26

                                
Query: 66 ttaatattagttgacagaggga 87
           | ||||||||| |||||||||
Sbjct: 25 cttatattagtttacagaggga 4



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                
Query: 9  tccctccgtaaactaatataagagcatttagaacacta 46
          |||||| |||||||||||||||| | |||||| |||||
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcacta 41




>48304_ave-miR1120:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                    
Query: 6  tactccctccgtaaactaatataagagcatttagaacactat 47
          ||||||||| |||||  ||||||||||| |||||| ||||||
Sbjct: 4  tactccctctgtaaagaaatataagagcgtttagatcactat 45