miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 95.6 bits (48), Expect = 5e-21
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 6 tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
||||| ||||||||| |||||| |||| ||||||||||| |||||||||| ||||||||
Sbjct: 9 tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68
Query: 66 cttatatttctttaaggagg 85
|||||||||||||| |||||
Sbjct: 69 cttatatttctttacggagg 88
Score = 60.0 bits (30), Expect = 3e-10
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 6 tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
||||| ||| ||||| |||||||||||| |||||||||||| |||||| ||||| ||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacact 34
Query: 66 cttatatttcttta 79
|| |||||||||||
Sbjct: 33 ctaatatttcttta 20
>54756_tmo-miR1120:pmrd
Length = 85
Score = 75.8 bits (38), Expect = 5e-15
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
|||||||||| ||||||||| | |||||||||||||||||||||| |||| | |||||||
Sbjct: 7 ctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttata 66
Query: 72 tt 73
||
Sbjct: 67 tt 68
Score = 56.0 bits (28), Expect = 5e-09
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 6 tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
||||| |||||||||| ||||||||| | |||||||||||| ||||||| |||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 66 cttatatt 73
||||||||
Sbjct: 25 cttatatt 18
>48304_ave-miR1120:pmrd
Length = 85
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/74 (86%), Gaps = 6/74 (8%)
Strand = Plus / Plus
Query: 6 tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
||||| ||||||||| |||||||||||| |||||||||||| |||| ||||||||
Sbjct: 4 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 57
Query: 66 cttatatttcttta 79
||||||||||||||
Sbjct: 58 cttatatttcttta 71
Score = 69.9 bits (35), Expect = 3e-13
Identities = 64/74 (86%), Gaps = 6/74 (8%)
Strand = Plus / Minus
Query: 6 tactctctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgct 65
||||| ||||||||| |||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 82 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 29
Query: 66 cttatatttcttta 79
||||||||||||||
Sbjct: 28 cttatatttcttta 15
>54761_tur-miR1120:pmrd
Length = 84
Score = 60.0 bits (30), Expect = 3e-10
Identities = 55/62 (88%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 12 ctctgtaaacaaatataagagcatttagatcactaaagtagtgatttaaacgctcttata 71
|||||||||| ||||||||| | ||||||||||| |||||||||| |||| | |||||||
Sbjct: 7 ctctgtaaactaatataagaccttttagatcact-aagtagtgatctaaaaggtcttata 65
Query: 72 tt 73
||
Sbjct: 66 tt 67
Score = 50.1 bits (25), Expect = 3e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 6 tactctctctgtaaacaaatataagagcatttagatcacta 46
||||| |||||||||| ||||||||| | ||||||||||||
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcacta 44
>54753_tae-miR2033b:pmrd
Length = 72
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 13 tctgtaaacaaatataagagcatttagatcacta 46
|||||||| ||||||||||| ||||||||||||
Sbjct: 65 tctgtaaagaaatataagagtgtttagatcacta 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 50 tagtgatttaaacgctcttatatttcttta 79
||||||| ||||| ||||||||||||||||
Sbjct: 32 tagtgatctaaacactcttatatttcttta 61
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 61 acgctcttatatttctttaaggagg 85
||||||||||||||||||| |||||
Sbjct: 30 acgctcttatatttctttatggagg 6
