miRNEST 2.0, an integrative microRNA resource :: BLAST
>54378_pvu-miR159:pmrd
Length = 174
Score = 103 bits (52), Expect = 6e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 25 gtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatg 84
||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 85 gatcccacagtactacccat 104
||||||||||| ||||||||
Sbjct: 61 gatcccacagttctacccat 80
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 173 atccttatttggattgaagggagctctac 201
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 103 bits (52), Expect = 6e-23
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 25 gtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatg 84
||||||||||||||||||||| |||| |||| |||||||||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 85 gatcccacagtactacccat 104
||||||||||| ||||||||
Sbjct: 61 gatcccacagttctacccat 80
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 173 atccttatttggattgaagggagctctac 201
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>48539_gma-miR159a:pmrd
Length = 214
Score = 97.6 bits (49), Expect = 4e-21
Identities = 73/81 (90%)
Strand = Plus / Plus
Query: 24 agtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctat 83
|||||||||||||||||||||| |||| |||| |||||| ||||||||||| ||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 84 ggatcccacagtactacccat 104
|||||||||||| ||||||||
Sbjct: 79 ggatcccacagttctacccat 99
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 93.7 bits (47), Expect = 5e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||||
Sbjct: 3 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 62
Query: 83 tggatcc 89
|||||||
Sbjct: 63 tggatcc 69
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctcta 200
|||||| | |||||||||||||||||||||
Sbjct: 140 agatccctttttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 93.7 bits (47), Expect = 5e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 83 tggatcc 89
|||||||
Sbjct: 68 tggatcc 74
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctcta 200
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 93.7 bits (47), Expect = 5e-20
Identities = 62/67 (92%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||||| ||||| ||||| |||| |||||||||||||
Sbjct: 8 gagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagcta 67
Query: 83 tggatcc 89
|||||||
Sbjct: 68 tggatcc 74
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctcta 200
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>54777_vvi-miR159c:pmrd
Length = 190
Score = 87.7 bits (44), Expect = 3e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| |||||||||| ||||| |||||||||||| | ||
Sbjct: 6 gagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgactta 65
Query: 83 tggatcccacag 94
||||||||||||
Sbjct: 66 tggatcccacag 77
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctctaca 202
|||||||| |||||||||||||||||||||||
Sbjct: 151 agatccttgtttggattgaagggagctctaca 182
>51603_ptc-miR159b:pmrd
Length = 187
Score = 71.9 bits (36), Expect = 2e-13
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 23 gagtggagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagcta 82
||||||||||||||||||||||| ||| | || || ||||| ||| |||||||| |||||
Sbjct: 8 gagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagcta 67
Query: 83 tggatcccacag 94
|| |||||||||
Sbjct: 68 tgaatcccacag 79
Score = 44.1 bits (22), Expect = 5e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 171 agatccttatttggattgaagggagctcta 200
||||| || |||||||||||||||||||||
Sbjct: 149 agatctttttttggattgaagggagctcta 178
>48701_mtr-miR159c:pmrd
Length = 44
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctacat 203
||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacat 24
>48728_mtr-miR319b:pmrd
Length = 42
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 181 ttggattgaagggagctctacat 203
|||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacat 23
>48686_ltu-miR159:pmrd
Length = 345
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctaca 202
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctaca 202
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctaca 202
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>54540_sly-miR159:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tggagctccttgaagtccaaca 47
||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaaca 22
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctcta 200
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 181 ttggattgaagggagctctaca 202
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 agctgctaagctatggatccca 91
||||||||||||||||||||||
Sbjct: 48 agctgctaagctatggatccca 69
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 70 agctgctaagctatggatccca 91
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctctac 201
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctcta 200
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54931_zma-miR159b:pmrd
Length = 221
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 182 tttggattgaagggagctct 201
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 180 tttggattgaagggagctct 199
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
