miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54466_sbi-miR172d:pmrd
          Length = 111

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 95  atgagaatcttgatgatgctgcatcag 121
           |||||||||||||||||||||||||||
Sbjct: 70  atgagaatcttgatgatgctgcatcag 96




>49516_osa-miRf10301-akr:pmrd
          Length = 123

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 95  atgagaatcttgatgatgctgcatcag 121
           |||||||||||||||||||||||||||
Sbjct: 84  atgagaatcttgatgatgctgcatcag 110




>48909_osa-miR172d:pmrd
          Length = 130

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 95  atgagaatcttgatgatgctgcatcag 121
           |||||||||||||||||||||||||||
Sbjct: 88  atgagaatcttgatgatgctgcatcag 114




>48133_ath-miRf11033-akr:pmrd
          Length = 121

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 94  aatgagaatcttgatgatgctgcatcagaaatcaa 128
           |||||||||||||||||||||||||| | ||||||
Sbjct: 83  aatgagaatcttgatgatgctgcatcggcaatcaa 117




>47531_ath-miRf10431-akr:pmrd
          Length = 126

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 94  aatgagaatcttgatgatgctgcatcagaaatcaa 128
           |||||||||||||||||||||||||| | ||||||
Sbjct: 87  aatgagaatcttgatgatgctgcatcggcaatcaa 121




>46882_aqc-miR172a:pmrd
          Length = 135

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 95  atgagaatcttgatgatgctgcatcag 121
           |||||||||||||||||||||||||||
Sbjct: 95  atgagaatcttgatgatgctgcatcag 121




>52946_ptc-miRf11124-akr:pmrd
          Length = 138

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  tgagaatcttgatgatgctgcatcag 121
           ||||||||||||||||||||||||||
Sbjct: 102 tgagaatcttgatgatgctgcatcag 127



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  aatgagaatcttgatgatgctgca 117
           |||| |||||||||||||||||||
Sbjct: 39  aatgtgaatcttgatgatgctgca 16




>51947_ptc-miRf10125-akr:pmrd
          Length = 136

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  tgagaatcttgatgatgctgcatcag 121
           ||||||||||||||||||||||||||
Sbjct: 101 tgagaatcttgatgatgctgcatcag 126



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  aatgagaatcttgatgatgctgca 117
           |||| |||||||||||||||||||
Sbjct: 38  aatgtgaatcttgatgatgctgca 15




>51700_ptc-miR172c:pmrd
          Length = 128

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  tgagaatcttgatgatgctgcatcag 121
           ||||||||||||||||||||||||||
Sbjct: 97  tgagaatcttgatgatgctgcatcag 122



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  aatgagaatcttgatgatgctgca 117
           |||| |||||||||||||||||||
Sbjct: 35  aatgtgaatcttgatgatgctgca 12




>51698_ptc-miR172a:pmrd
          Length = 129

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  tgagaatcttgatgatgctgcatcag 121
           ||||||||||||||||||||||||||
Sbjct: 98  tgagaatcttgatgatgctgcatcag 123



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  aatgagaatcttgatgatgctgca 117
           |||| |||||||||||||||||||
Sbjct: 35  aatgtgaatcttgatgatgctgca 12




>48571_gma-miR172b:pmrd
          Length = 153

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  tgagaatcttgatgatgctgcatcag 121
           ||||||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgcatcag 137




>48570_gma-miR172a:pmrd
          Length = 159

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 96  tgagaatcttgatgatgctgcatcag 121
           ||||||||||||||||||||||||||
Sbjct: 118 tgagaatcttgatgatgctgcatcag 143




>48410_bra-miR172b:pmrd
          Length = 107

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcatca 104




>48409_bra-miR172b:pmrd
          Length = 107

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcatca 104




>48408_bra-miR172a:pmrd
          Length = 119

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 84  atgagaatcttgatgatgctgcatca 109




>48388_bol-miR172b:pmrd
          Length = 107

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcatca 104




>48387_bol-miR172a:pmrd
          Length = 119

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 84  atgagaatcttgatgatgctgcatca 109




>47664_ath-miRf10564-akr:pmrd
          Length = 101

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 72  atgagaatcttgatgatgctgcatca 97




>46985_ath-miR172b:pmrd
          Length = 95

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 68  atgagaatcttgatgatgctgcatca 93




>46984_ath-miR172b:pmrd
          Length = 95

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 95  atgagaatcttgatgatgctgcatca 120
           ||||||||||||||||||||||||||
Sbjct: 68  atgagaatcttgatgatgctgcatca 93




>46983_ath-miR172a:pmrd
          Length = 102

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 94  aatgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||||
Sbjct: 74  aatgagaatcttgatgatgctgcatc 99




>54837_vvi-miR172a:pmrd
          Length = 110

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 95  atgagaatcttgatgatgctgcatc 119
           |||||||||||||||||||||||||
Sbjct: 32  atgagaatcttgatgatgctgcatc 8




>48693_mes-miR172:pmrd
          Length = 146

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 95  atgagaatcttgatgatgctgcatc 119
           |||||||||||||||||||||||||
Sbjct: 113 atgagaatcttgatgatgctgcatc 137




>55043_zma-miR172d:pmrd
          Length = 74

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 51  atgagaatcttgatgatgctgcat 74




>55042_zma-miR172c:pmrd
          Length = 123

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 100 atgagaatcttgatgatgctgcat 123




>55041_zma-miR172b:pmrd
          Length = 126

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 103 atgagaatcttgatgatgctgcat 126




>55040_zma-miR172a:pmrd
          Length = 83

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 60  atgagaatcttgatgatgctgcat 83




>54840_vvi-miR172d:pmrd
          Length = 109

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 76  atgagaatcttgatgatgctgcat 99



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 99  gaatcttgatgatgctgcatcag 121
           |||||||||||||||||||||||
Sbjct: 28  gaatcttgatgatgctgcatcag 6




>54838_vvi-miR172b:pmrd
          Length = 118

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 31  tgagaatcttgatgatgctgcatc 8




>54668_stu-miR172:pmrd
          Length = 93

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 70  atgagaatcttgatgatgctgcat 93




>54465_sbi-miR172c:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 96  atgagaatcttgatgatgctgcat 119




>54463_sbi-miR172a:pmrd
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 95  atgagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||||
Sbjct: 79  atgagaatcttgatgatgctgcat 102




>52845_ptc-miRf11023-akr:pmrd
          Length = 133

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 105 tgagaatcttgatgatgctgcatc 128




>51903_ptc-miRf10081-akr:pmrd
          Length = 147

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 112 tgagaatcttgatgatgctgcatc 135




>51703_ptc-miR172f:pmrd
          Length = 161

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 130 tgagaatcttgatgatgctgcatc 153




>51699_ptc-miR172b:pmrd
          Length = 140

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 109 tgagaatcttgatgatgctgcatc 132




>51344_ppd-miR172b:pmrd
          Length = 139

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 31  tgagaatcttgatgatgctgcatc 8




>51343_ppd-miR172a:pmrd
          Length = 139

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgcatc 130




>48906_osa-miR172a:pmrd
          Length = 109

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 96  tgagaatcttgatgatgctgcatc 119
           ||||||||||||||||||||||||
Sbjct: 77  tgagaatcttgatgatgctgcatc 100




>54556_sly-miR172b:pmrd
          Length = 135

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 96  tgagaatcttgatgatgctgcat 118
           |||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgcat 135




>48907_osa-miR172b:pmrd
          Length = 238

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 99  gaatcttgatgatgctgcatcagaaat 125
           ||||||||||||||||||||| |||||
Sbjct: 209 gaatcttgatgatgctgcatcggaaat 235




>48151_ath-miRf11051-akr:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 95  atgagaatcttgatgatgctgca 117
           |||||||||||||||||||||||
Sbjct: 95  atgagaatcttgatgatgctgca 117




>47855_ath-miRf10755-akr:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 95  atgagaatcttgatgatgctgca 117
           |||||||||||||||||||||||
Sbjct: 39  atgagaatcttgatgatgctgca 17




>47734_ath-miRf10634-akr:pmrd
          Length = 138

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 99  gaatcttgatgatgctgcatcag 121
           |||||||||||||||||||||||
Sbjct: 37  gaatcttgatgatgctgcatcag 15




>47545_ath-miRf10445-akr:pmrd
          Length = 131

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 95  atgagaatcttgatgatgctgca 117
           |||||||||||||||||||||||
Sbjct: 94  atgagaatcttgatgatgctgca 116




>46988_ath-miR172e:pmrd
          Length = 125

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 99  gaatcttgatgatgctgcatcag 121
           |||||||||||||||||||||||
Sbjct: 96  gaatcttgatgatgctgcatcag 118




>46986_ath-miR172c:pmrd
          Length = 133

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 95  atgagaatcttgatgatgctgca 117
           |||||||||||||||||||||||
Sbjct: 95  atgagaatcttgatgatgctgca 117




>54555_sly-miR172a:pmrd
          Length = 106

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 97  gagaatcttgatgatgctgcat 118
           ||||||||||||||||||||||
Sbjct: 85  gagaatcttgatgatgctgcat 106




>46987_ath-miR172d:pmrd
          Length = 124

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  tgagaatcttgatgatgctgca 117
           ||||||||||||||||||||||
Sbjct: 86  tgagaatcttgatgatgctgca 107




>53739_ptc-miRf11917-akr:pmrd
          Length = 143

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  gaatcttgatgatgctgcatc 119
           |||||||||||||||||||||
Sbjct: 109 gaatcttgatgatgctgcatc 129




>52835_ptc-miRf11013-akr:pmrd
          Length = 136

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  gaatcttgatgatgctgcatc 119
           |||||||||||||||||||||
Sbjct: 31  gaatcttgatgatgctgcatc 11




>52315_ptc-miRf10493-akr:pmrd
          Length = 141

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  gaatcttgatgatgctgcatc 119
           |||||||||||||||||||||
Sbjct: 108 gaatcttgatgatgctgcatc 128




>51901_ptc-miRf10079-akr:pmrd
          Length = 132

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 99  gaatcttgatgatgctgcatc 119
           |||||||||||||||||||||
Sbjct: 29  gaatcttgatgatgctgcatc 9




>51702_ptc-miR172e:pmrd
          Length = 133

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  gaatcttgatgatgctgcatc 119
           |||||||||||||||||||||
Sbjct: 105 gaatcttgatgatgctgcatc 125




>51701_ptc-miR172d:pmrd
          Length = 182

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  gaatcttgatgatgctgcatc 119
           |||||||||||||||||||||
Sbjct: 154 gaatcttgatgatgctgcatc 174




>48637_gra-miR172a:pmrd
          Length = 148

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 98  agaatcttgatgatgctgcat 118
           |||||||||||||||||||||
Sbjct: 1   agaatcttgatgatgctgcat 21




>46883_aqc-miR172b:pmrd
          Length = 108

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 99  gaatcttgatgatgctgcatc 119
           |||||||||||||||||||||
Sbjct: 87  gaatcttgatgatgctgcatc 107




>55045_zma-miR172f:pmrd
          Length = 135

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  gaatcttgatgatgctgcat 118
           ||||||||||||||||||||
Sbjct: 116 gaatcttgatgatgctgcat 135




>55044_zma-miR172e:pmrd
          Length = 174

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  gaatcttgatgatgctgcat 118
           ||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155




>54464_sbi-miR172b:pmrd
          Length = 170

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  gaatcttgatgatgctgcat 118
           ||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170