miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54836_vvi-miR171i:pmrd
          Length = 103

 Score = 60.0 bits (30), Expect = 4e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 22 gatgttggaatggctcaatcaaatcagatctccc 55
          |||||||||||||||||||||||||| |||||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctccc 46



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 83  tgattgagccgtgccaatatcat 105
           |||||||||||||||||||||||
Sbjct: 69  tgattgagccgtgccaatatcat 91




>51346_ppe-miR171:pmrd
          Length = 97

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 76  tttagtttgattgagccgtgccaatatcat 105
           |||| |||||||||||||||||||||||||
Sbjct: 60  tttaatttgattgagccgtgccaatatcat 89




>51345_ppe-miR170:pmrd
          Length = 97

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 76  tttagtttgattgagccgtgccaatatcat 105
           |||| |||||||||||||||||||||||||
Sbjct: 60  tttaatttgattgagccgtgccaatatcat 89




>54831_vvi-miR171d:pmrd
          Length = 100

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 64  gtttgattgagccgtgccaatatca 88




>54551_sly-miR171a:pmrd
          Length = 122

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 75  ttttagtttgattgagccgtgccaatatc 103
           |||| ||||||||||||||||||||||||
Sbjct: 79  ttttcgtttgattgagccgtgccaatatc 107




>54452_sbi-miR171a:pmrd
          Length = 161

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatca 143




>51882_ptc-miRf10060-akr:pmrd
          Length = 87

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 60  gtttgattgagccgtgccaatatca 84




>51685_ptc-miR171b:pmrd
          Length = 103

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 68  gtttgattgagccgtgccaatatca 92




>51684_ptc-miR171a:pmrd
          Length = 104

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 69  gtttgattgagccgtgccaatatca 93




>48403_bra-miR171a:pmrd
          Length = 85

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 59  gtttgattgagccgtgccaatatca 83




>48386_bol-miR171a:pmrd
          Length = 96

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 65  gtttgattgagccgtgccaatatca 89




>48367_bna-miR171e:pmrd
          Length = 92

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 64  gtttgattgagccgtgccaatatca 88




>48366_bna-miR171d:pmrd
          Length = 96

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 80  gtttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||||
Sbjct: 65  gtttgattgagccgtgccaatatca 89




>55029_zma-miR171b:pmrd
          Length = 85

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  tttgattgagccgtgccaatatca 104
           ||||||||||||||||||||||||
Sbjct: 60  tttgattgagccgtgccaatatca 83




>54830_vvi-miR171c:pmrd
          Length = 103

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  tttgattgagccgtgccaatatca 104
           ||||||||||||||||||||||||
Sbjct: 68  tttgattgagccgtgccaatatca 91




>54828_vvi-miR171a:pmrd
          Length = 99

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 83  tgattgagccgtgccaatatcatg 106
           ||||||||||||||||||||||||
Sbjct: 68  tgattgagccgtgccaatatcatg 91




>54462_sbi-miR171k:pmrd
          Length = 87

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  tttgattgagccgtgccaatatca 104
           ||||||||||||||||||||||||
Sbjct: 60  tttgattgagccgtgccaatatca 83




>48897_osa-miR171c:pmrd
          Length = 99

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  tttgattgagccgtgccaatatca 104
           ||||||||||||||||||||||||
Sbjct: 67  tttgattgagccgtgccaatatca 90




>48896_osa-miR171b:pmrd
          Length = 100

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  tttgattgagccgtgccaatatca 104
           ||||||||||||||||||||||||
Sbjct: 68  tttgattgagccgtgccaatatca 91




>48723_mtr-miR171g:pmrd
          Length = 105

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 80  gtttgattgagccgtgccaatatc 103
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>48722_mtr-miR171d:pmrd
          Length = 105

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 80  gtttgattgagccgtgccaatatc 103
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>48312_bdi-miR171c:pmrd
          Length = 86

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  tttgattgagccgtgccaatatca 104
           ||||||||||||||||||||||||
Sbjct: 62  tttgattgagccgtgccaatatca 85




>46979_ath-miR171c:pmrd
          Length = 116

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 81  tttgattgagccgtgccaatatca 104
           ||||||||||||||||||||||||
Sbjct: 85  tttgattgagccgtgccaatatca 108




>46880_aqc-miR171e:pmrd
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 80  gtttgattgagccgtgccaatatc 103
           ||||||||||||||||||||||||
Sbjct: 24  gtttgattgagccgtgccaatatc 1




>46876_aqc-miR171a:pmrd
          Length = 102

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 80  gtttgattgagccgtgccaatatc 103
           ||||||||||||||||||||||||
Sbjct: 77  gtttgattgagccgtgccaatatc 100




>55036_zma-miR171i:pmrd
          Length = 104

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  ttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||
Sbjct: 64  ttgattgagccgtgccaatatca 86




>55033_zma-miR171f:pmrd
          Length = 155

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 82  ttgattgagccgtgccaatatca 104
           |||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatca 136




>51692_ptc-miR171i:pmrd
          Length = 129

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 81  tttgattgagccgtgccaatatc 103
           |||||||||||||||||||||||
Sbjct: 98  tttgattgagccgtgccaatatc 120




>51690_ptc-miR171g:pmrd
          Length = 100

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 70  gggtgttttagtttgattgagccgtgccaatatca 104
           |||| ||||| | ||||||||||||||||||||||
Sbjct: 58  gggtcttttaatctgattgagccgtgccaatatca 92




>46879_aqc-miR171d:pmrd
          Length = 106

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 81  tttgattgagccgtgccaatatc 103
           |||||||||||||||||||||||
Sbjct: 82  tttgattgagccgtgccaatatc 104




>55039_zma-miR171m:pmrd
          Length = 113

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  ttgattgagccgtgccaatatc 103
           ||||||||||||||||||||||
Sbjct: 92  ttgattgagccgtgccaatatc 113




>55037_zma-miR171j:pmrd
          Length = 129

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  tgattgagccgtgccaatatca 104
           ||||||||||||||||||||||
Sbjct: 90  tgattgagccgtgccaatatca 111




>55024_zma-miR170m:pmrd
          Length = 115

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  ttgattgagccgtgccaatatc 103
           ||||||||||||||||||||||
Sbjct: 94  ttgattgagccgtgccaatatc 115




>54453_sbi-miR171b:pmrd
          Length = 132

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  tgattgagccgtgccaatatca 104
           ||||||||||||||||||||||
Sbjct: 93  tgattgagccgtgccaatatca 114




>51691_ptc-miR171h:pmrd
          Length = 100

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                            
Query: 22 gatgttggaatggctcaatcaaatcagatctccc 55
          |||||||| |||||||||||| |||| |||||||
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctccc 44



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  tgattgagccgtgccaatatca 104
           ||||||||||||||||||||||
Sbjct: 71  tgattgagccgtgccaatatca 92




>49676_osa-miRf10461-akr:pmrd
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  tgattgagccgtgccaatatca 104
           ||||||||||||||||||||||
Sbjct: 95  tgattgagccgtgccaatatca 116




>48900_osa-miR171f:pmrd
          Length = 127

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  tgattgagccgtgccaatatca 104
           ||||||||||||||||||||||
Sbjct: 97  tgattgagccgtgccaatatca 118




>48567_gma-miR171a:pmrd
          Length = 102

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 85  attgagccgtgccaatatcatgaactactg 114
           |||||||||||||||||||| |||| ||||
Sbjct: 70  attgagccgtgccaatatcacgaaccactg 99




>46877_aqc-miR171b:pmrd
          Length = 77

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 tgttggaatggctcaatcaaat 45
          ||||||||||||||||||||||
Sbjct: 3  tgttggaatggctcaatcaaat 24



 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 83  tgattgagccgtgccaatatca 104
           ||||||||||||||||||||||
Sbjct: 55  tgattgagccgtgccaatatca 76




>55032_zma-miR171e:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>55031_zma-miR171d:pmrd
          Length = 121

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 82  tgattgagccgtgccaatatc 102




>54680_tae-miR170b:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 74  tgattgagccgtgccaatatc 94




>54579_smo-miR171a:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatca 123




>54460_sbi-miR171i:pmrd
          Length = 90

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 68  tgattgagccgtgccaatatc 88




>54455_sbi-miR171d:pmrd
          Length = 154

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135




>52725_ptc-miRf10903-akr:pmrd
          Length = 85

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 60  tgattgagccgtgccaatatc 80




>51689_ptc-miR171f:pmrd
          Length = 130

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121




>51688_ptc-miR171e:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 65  tgattgagccgtgccaatatc 85




>48905_osa-miR171n:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 79  tgattgagccgtgccaatatc 99




>48904_osa-miR171m:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>48899_osa-miR171e:pmrd
          Length = 119

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 89  tgattgagccgtgccaatatc 109




>48898_osa-miR171d:pmrd
          Length = 135

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125




>48894_osa-miR170b:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 87  tgattgagccgtgccaatatc 107




>48893_osa-miR170a:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 79  tgattgagccgtgccaatatc 99




>48663_hvv-miR171:pmrd
          Length = 78

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 58  tgattgagccgtgccaatatc 78




>48662_hvv-miR170:pmrd
          Length = 78

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tgattgagccgtgccaatatc 103
           |||||||||||||||||||||
Sbjct: 58  tgattgagccgtgccaatatc 78




>48406_bra-miR171d:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 71  gattgagccgtgccaatatca 91




>48405_bra-miR171c:pmrd
          Length = 88

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 65  gattgagccgtgccaatatca 85




>48404_bra-miR171b:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 72  gattgagccgtgccaatatca 92




>48365_bna-miR171c:pmrd
          Length = 88

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 65  gattgagccgtgccaatatca 85




>48364_bna-miR171b:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 71  gattgagccgtgccaatatca 91




>48363_bna-miR171a:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 72  gattgagccgtgccaatatca 92




>46978_ath-miR171b:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  gattgagccgtgccaatatca 104
           |||||||||||||||||||||
Sbjct: 76  gattgagccgtgccaatatca 96