miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54696_tae-miR1121:pmrd
Length = 98
Score = 81.8 bits (41), Expect = 6e-17
Identities = 41/41 (100%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaagaaatataagagcgtttagatcacta 49
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcacta 53
Score = 56.0 bits (28), Expect = 3e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 9 tactccctccgtaaagaaatataagagcgtttagatcact 48
||||||||| |||||||||||| |||| ||||||||||||
Sbjct: 9 tactccctctgtaaagaaatattagagtgtttagatcact 48
>48304_ave-miR1120:pmrd
Length = 85
Score = 75.8 bits (38), Expect = 4e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 9 tactccctccgtaaagaaatataagagcgtttagatcactat 50
||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4 tactccctctgtaaagaaatataagagcgtttagatcactat 45
Score = 69.9 bits (35), Expect = 2e-13
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 8 atactccctccgtaaagaaatataagagcgtttagatca 46
|||||||||| ||||||||||||||||||||||||||||
Sbjct: 83 atactccctctgtaaagaaatataagagcgtttagatca 45
>54753_tae-miR2033b:pmrd
Length = 72
Score = 60.0 bits (30), Expect = 2e-10
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaagaaatataagagcgtttagatcactat 50
|||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgtttagatcactat 31
Score = 52.0 bits (26), Expect = 5e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 tactccctccgtaaagaaatataagagcgt 38
|||||||||| |||||||||||||||||||
Sbjct: 1 tactccctccataaagaaatataagagcgt 30
>54761_tur-miR1120:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaagaaatataagagcgtttagatcacta 49
||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcacta 44
>54756_tmo-miR1120:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 5e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgtaaagaaatataagagcgtttagatcacta 49
||||||||| ||||| ||||||||| | ||||||||||||
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcacta 45
