miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54701_tae-miR1126:pmrd
          Length = 164

 Score =  137 bits (69), Expect = 3e-33
 Identities = 141/164 (85%), Gaps = 2/164 (1%)
 Strand = Plus / Plus

                                                                       
Query: 15  gtactccctccgttcctaaatataagtctttatagagatttcattgcgtactacatacga 74
           |||||| ||||||||||||||||||||||||||||| ||| || |  | |||||||||| 
Sbjct: 1   gtactctctccgttcctaaatataagtctttatagaaattccactatggactacatacgg 60

                                                                       
Query: 75  a--aaaatgagtgaatctacactctaaaatacgtctatatacatccgtatgtagtcttta 132
           |  ||||| | ||||||||||||||||||| | |||| |||||| ||||||| ||   ||
Sbjct: 61  agcaaaataaatgaatctacactctaaaatgcatctacatacattcgtatgtggttcata 120

                                                       
Query: 133 ttgaaatctctaaaaagacttatatttagaaacggagggagtat 176
            | ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 gtaaaatctctacaaagacttatatttagaaacggagggagtat 164



 Score = 63.9 bits (32), Expect = 4e-11
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 16  tactccctccgttcctaaatataagtctttatagagattt 55
           ||||||||||||| |||||||||||||||| |||||||||
Sbjct: 163 tactccctccgtttctaaatataagtctttgtagagattt 124



 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 116 tccgtatgtagtctttattgaaatctctaaaaagacttatatttagaaacggagggagta 175
           |||||||||||||  || || ||| |||| |||||||||||||||| ||||||| |||||
Sbjct: 61  tccgtatgtagtccatagtggaatttctataaagacttatatttaggaacggagagagta 2




>54697_tae-miR1122:pmrd
          Length = 295

 Score =  137 bits (69), Expect = 3e-33
 Identities = 126/144 (87%), Gaps = 2/144 (1%)
 Strand = Plus / Minus

                                                                       
Query: 15  gtactccctccgttcctaaatataagtctttatagagatttcattgcgtactacatacga 74
           |||| ||||| ||||||||||||| | |||  |||||||| || |  | |||||||||||
Sbjct: 293 gtacaccctctgttcctaaatatatgccttcttagagattccactatggactacatacga 234

                                                                       
Query: 75  a--aaaatgagtgaatctacactctaaaatacgtctatatacatccgtatgtagtcttta 132
           |  |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct: 233 agtaaaatgagtgaatctacactctaaaatatgtctatatacatccgtatgtagtttgta 174

                                   
Query: 133 ttgaaatctctaaaaagacttata 156
            || ||||||||||||||||||||
Sbjct: 173 gtggaatctctaaaaagacttata 150




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 gtactccctccgttcctaaatataag 40
          ||||||||||||||||||||||||||
Sbjct: 5  gtactccctccgttcctaaatataag 30



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 151 cttatatttagaaacggagggagta 175
           ||||||||||| |||||||||||||
Sbjct: 30  cttatatttaggaacggagggagta 6



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          ||||||||| |||||||||||||||
Sbjct: 77 tactccctctgttcctaaatataag 53




>51023_osa-miRf11808-akr:pmrd
          Length = 117

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 14 tgtactccctccgttcctaaatataa 39
          |||||||||||||| |||||||||||
Sbjct: 3  tgtactccctccgtccctaaatataa 28



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 16  tactccctccgttcctaaatataag 40
           |||||||||||| ||||||||||||
Sbjct: 113 tactccctccgtccctaaatataag 89




>50827_osa-miRf11612-akr:pmrd
          Length = 126

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 16  tactccctccgttcctaaatataagt 41
           |||||||||||| |||||||||||||
Sbjct: 126 tactccctccgtccctaaatataagt 101




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 15 gtactccctccgttcctaaatataa 39
          ||||||||||||| |||||||||||
Sbjct: 6  gtactccctccgtccctaaatataa 30




>49712_osa-miRf10497-akr:pmrd
          Length = 172

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgttcctaaatataag 40
          |||||||||||| ||||||||||||
Sbjct: 2  tactccctccgtccctaaatataag 26




>49031_osa-miR806h:pmrd
          Length = 271

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 atttagaaacggagggagta 175
           ||||||||||||||||||||
Sbjct: 233 atttagaaacggagggagta 252