miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 63.9 bits (32), Expect = 3e-11
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                       
Query: 37  ctctgtaaacaaatataacaagttttaggtcactactttaatgacctaaaacgtcctata 96
           |||||||||| ||||||| |  |||||| ||||||||||| ||| |||||| ||| ||||
Sbjct: 79  ctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggtcttata 20

                           
Query: 97  tttatttacagaggga 112
           ||  ||||||||||||
Sbjct: 19  ttagtttacagaggga 4



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 65/79 (82%)
 Strand = Plus / Plus

                                                                       
Query: 37  ctctgtaaacaaatataacaagttttaggtcactactttaatgacctaaaacgtcctata 96
           |||||||||| ||||||| |  |||||| ||||||   || ||| |||||| ||| ||||
Sbjct: 7   ctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtcttata 66

                              
Query: 97  tttatttacagagggagta 115
           ||  |||||||||||||||
Sbjct: 67  ttagtttacagagggagta 85




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 64/76 (84%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                       
Query: 37  ctctgtaaacaaatataacaagttttaggtcactactttaatgacctaaaacgtcctata 96
           |||||||||| ||||||| |  |||||| ||||||||| | ||| |||||| ||| ||||
Sbjct: 78  ctctgtaaactaatataagaccttttagatcactactt-agtgatctaaaaggtcttata 20

                           
Query: 97  tttatttacagaggga 112
           ||  ||||||||||||
Sbjct: 19  ttagtttacagaggga 4




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 94  atatttatttacagagggagtaca 117
           |||||| |||||||||||||||||
Sbjct: 30  atatttctttacagagggagtaca 7




>48304_ave-miR1120:pmrd
          Length = 85

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 93  tatatttatttacagagggagtac 116
           ||||||| ||||||||||||||||
Sbjct: 26  tatatttctttacagagggagtac 3