miRNEST 2.0, an integrative microRNA resource :: BLAST
>46909_ata-miR1122:pmrd
Length = 170
Score = 153 bits (77), Expect = 4e-38
Identities = 107/117 (91%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
||||||||||||||| || || ||||||||| |||||||||||||||| |||||||||||
Sbjct: 26 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 85
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||||||||||||||||||| ||||||| || |||||||||||||||
Sbjct: 86 ctagatacatccatttttatccatttctgcaacaagtagttccggacggagggagta 142
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 93 atccatttctctgacaagtattttcggacggagggagta 131
||||||||||| ||||| || ||||||||||||||||||
Sbjct: 64 atccatttctccgacaaataatttcggacggagggagta 26
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggat 53
|||||||||||||||||| ||||||| | || |||||||
Sbjct: 142 tactccctccgtccggaactacttgttgcagaaatggat 104
>54703_tae-miR1128:pmrd
Length = 188
Score = 115 bits (58), Expect = 9e-27
Identities = 76/82 (92%)
Strand = Plus / Minus
Query: 50 ggatgtatctagatgtattttagttctagatacatccatttttatccatttctctgacaa 109
||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||
Sbjct: 115 ggatgtatctagatgtattttagttctagatacatccccttttattcattttgatgacaa 56
Query: 110 gtattttcggacggagggagta 131
||||||||||||||||||||||
Sbjct: 55 gtattttcggacggagggagta 34
Score = 52.0 bits (26), Expect = 1e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 74 tctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||||||||||||| || ||||||||| |||||| ||||| |||||||||||||||
Sbjct: 103 tctagatacatccccttctatccattttgatgacaactatttccggacggagggagta 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 13 actactccctccgtccggaaatacttgtc 41
||||||||||||||||| |||||||||||
Sbjct: 32 actactccctccgtccgaaaatacttgtc 60
>54711_tae-miR1136:pmrd
Length = 107
Score = 103 bits (52), Expect = 4e-23
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 15 tactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagtt 74
|||||||||||| | ||| ||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 60
Query: 75 ctagatacatccattt 90
||| ||||||||||||
Sbjct: 61 ctaaatacatccattt 76
>54710_tae-miR1135:pmrd
Length = 109
Score = 101 bits (51), Expect = 1e-22
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 14 ctactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtattttagt 73
||||||||||||| ||||| ||||||||| || ||| |||||||||||| ||||||||||
Sbjct: 109 ctactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgtattttagt 50
Query: 74 tctagatacatccat 88
|||||||||||||||
Sbjct: 49 tctagatacatccat 35
>54702_tae-miR1127:pmrd
Length = 150
Score = 87.7 bits (44), Expect = 2e-18
Identities = 102/120 (85%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 12 aactactccctccgtccggaaatacttgtcggaggaatggatgtatctagatgtatttta 71
||||||||| ||||| ||||| |||| ||| || ||| ||||||||| ||| ||||||
Sbjct: 16 aactactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcatttta 75
Query: 72 gttctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
||| ||||||||||||||||||| ||||| | ||||||||| || || ||||||||||||
Sbjct: 76 gttgtagatacatccatttttat-catttttgtgacaagtaattccgaacggagggagta 134
>48647_hpi-miR1122:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 75 ctagatacatccatttttatccatttctctgacaagtattttcggacggagggagta 131
|||||||||||| | |||| || ||| ||||||| ||||| ||||||||||||||
Sbjct: 84 ctagatacatccgtatttagacaaatctatgacaagaattttgggacggagggagta 28
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 111 tattttcggacggagggagtacta 134
|||||| |||||||||||||||||
Sbjct: 34 tattttgggacggagggagtacta 11
