miRNEST 2.0, an integrative microRNA resource :: BLAST
>46909_ata-miR1122:pmrd
Length = 170
Score = 168 bits (85), Expect = 7e-43
Identities = 109/117 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| ||| ||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 142 tactccctccgtccggaactacttgttgcagaaatggataaaaatggatgtatctagaac 83
Query: 74 taaaatacgtctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||
Sbjct: 82 taaaatacgtctagatacatccatttctccgacaaataatttcggacggagggagta 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 94 ccatttccgcgacaagtaatttcggacggagggagta 130
||||||| || ||||||| || |||||||||||||||
Sbjct: 106 ccatttctgcaacaagtagttccggacggagggagta 142
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatg 49
|||||||||||||| ||||| |||||| |||||||
Sbjct: 26 tactccctccgtccgaaattatttgtcggagaaatg 61
>54710_tae-miR1135:pmrd
Length = 109
Score = 109 bits (55), Expect = 6e-25
Identities = 70/75 (93%)
Strand = Plus / Plus
Query: 57 atggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatttc 116
|||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |
Sbjct: 35 atggatgtatctagaactaaaatacgtctagatacatctatttctgcgacaagtaattcc 94
Query: 117 ggacggagggagtag 131
| |||||||||||||
Sbjct: 95 gaacggagggagtag 109
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaat 48
|||||||||||| | ||||||||||||||||||||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaat 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 83 tctagatacacccatttccgcgacaagtaatttcggacggagggagtag 131
|||||||||| |||| |||| ||||||||||| || | |||||||||||
Sbjct: 49 tctagatacatccatatccgagacaagtaattccgaatggagggagtag 1
>54711_tae-miR1136:pmrd
Length = 107
Score = 79.8 bits (40), Expect = 5e-16
Identities = 67/76 (88%)
Strand = Plus / Minus
Query: 55 aaatggatgtatctagaactaaaatacgtctagatacacccatttccgcgacaagtaatt 114
|||||||||||| |||||||||||||| |||||||||| |||| | |||||||||||||
Sbjct: 76 aaatggatgtatttagaactaaaatacatctagatacatccatacctgcgacaagtaatt 17
Query: 115 tcggacggagggagta 130
| ||||||||||||
Sbjct: 16 cggaacggagggagta 1
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcag 44
|||||||||||| ||||||||||||||||||
Sbjct: 1 tactccctccgttccgaattacttgtcgcag 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 83 tctagatacacccatttccgcgacaagtaatttcggacggagggagta 130
|||| ||||| ||||||| ||||| |||||||| ||||||||||||
Sbjct: 60 tctaaatacatccatttctgcgacgagtaatttgaaacggagggagta 107
>54703_tae-miR1128:pmrd
Length = 188
Score = 77.8 bits (39), Expect = 2e-15
Identities = 69/79 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||||| || |||||||| |||||||||||| |||||||||||||||
Sbjct: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
Query: 74 taaaatacgtctagataca 92
|||||||| ||||||||||
Sbjct: 94 taaaatacatctagataca 112
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 104 gacaagtaatttcggacggagggagtagta 133
|||||||| |||||||||||||||||||||
Sbjct: 60 gacaagtattttcggacggagggagtagta 31
>54702_tae-miR1127:pmrd
Length = 150
Score = 77.8 bits (39), Expect = 2e-15
Identities = 70/79 (88%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtcccgaattacttgtcgcagaaatgaataaaaatggatgtatctagaac 73
|||||||||||| | |||||||||||| || |||||| |||||||||||||||||| |||
Sbjct: 134 tactccctccgttcggaattacttgtcacaaaaatga-taaaaatggatgtatctacaac 76
Query: 74 taaaatacgtctagataca 92
|||||| | | ||||||||
Sbjct: 75 taaaatgcatttagataca 57
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actagtactccctccgtcccgaa 31
|||||||||||||||||||||||
Sbjct: 101 actagtactccctccgtcccgaa 79
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 9 actagtactccctccgtcccgaa 31
|||||||||||||||||||||||
Sbjct: 101 actagtactccctccgtcccgaa 79
>49925_osa-miRf10710-akr:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 9 actagtactccctccgtccc 28
||||||||||||||||||||
Sbjct: 113 actagtactccctccgtccc 94
>49070_osa-miR818d:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 9 actagtactccctccgtccc 28
||||||||||||||||||||
Sbjct: 132 actagtactccctccgtccc 113
