miRNEST 2.0, an integrative microRNA resource :: BLAST
>51756_ptc-miR399j:pmrd
Length = 112
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 2 tgcattacagggcaaaacctccattggcatgcagccac 39
||||||||||||||| ||||||||||||| ||||||||
Sbjct: 1 tgcattacagggcaagacctccattggcaggcagccac 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
|||||||||||||||| |||||||
Sbjct: 82 tgccaaaggagatttgtccggcaa 105
>52630_ptc-miRf10808-akr:pmrd
Length = 110
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 82 ccatgccaaaggagatttgcccggcaa 108
|||||||||||||||||||||||||||
Sbjct: 28 ccatgccaaaggagatttgcccggcaa 2
>51890_ptc-miRf10068-akr:pmrd
Length = 110
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 82 ccatgccaaaggagatttgcccggcaa 108
|||||||||||||||||||||||||||
Sbjct: 28 ccatgccaaaggagatttgcccggcaa 2
>51749_ptc-miR399c:pmrd
Length = 126
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 82 ccatgccaaaggagatttgcccggcaa 108
|||||||||||||||||||||||||||
Sbjct: 94 ccatgccaaaggagatttgcccggcaa 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 ttgcattacagggcaaaacctccattggcatgcagccac 39
|||||||||||||||| | |||||||||||||||||||
Sbjct: 8 ttgcattacagggcaag-cttccattggcatgcagccac 45
>51748_ptc-miR399b:pmrd
Length = 126
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 82 ccatgccaaaggagatttgcccggcaa 108
|||||||||||||||||||||||||||
Sbjct: 94 ccatgccaaaggagatttgcccggcaa 120
Score = 46.1 bits (23), Expect = 5e-06
Identities = 36/39 (92%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 1 ttgcattacagggcaaaacctccattggcatgcagccac 39
|||||||||||||||| | |||||||||||||||||||
Sbjct: 8 ttgcattacagggcaag-cttccattggcatgcagccac 45
>54881_vvi-miR399e:pmrd
Length = 112
Score = 52.0 bits (26), Expect = 9e-08
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 63 tgcattcctatagtgtgctccatgccaaaggagatttgcccggcaa 108
||||||| | |||||||| | ||||||||||||||||||||||||
Sbjct: 60 tgcattcttgtagtgtgccctctgccaaaggagatttgcccggcaa 105
>48377_bna-miR399:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccgg 105
|||||||||||||||||||||
Sbjct: 81 tgccaaaggagatttgcccgg 101
>47020_ath-miR399f:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccgg 105
|||||||||||||||||||||
Sbjct: 88 tgccaaaggagatttgcccgg 108
>54494_sbi-miR399f:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 81 tgccaaaggagatttgcccagcaa 104
>54493_sbi-miR399e:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 87 tgccaaaggagatttgcccagcaa 110
>51747_ptc-miR399a:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 91 tgccaaaggagatttgccccgcaa 114
>49373_osa-miRf10158-akr:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 85 tgccaaaggagatttgcccagcaa 108
>48969_osa-miR399f:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 87 tgccaaaggagatttgcccagcaa 110
>48968_osa-miR399e:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 88 tgccaaaggagatttgcccagcaa 111
>47535_ath-miRf10435-akr:pmrd
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 66 tgccaaaggagatttgccccgcaa 89
>47018_ath-miR399d:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 85 tgccaaaggagatttgcccggcaa 108
||||||||||||||||||| ||||
Sbjct: 70 tgccaaaggagatttgccccgcaa 93
