miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54829_vvi-miR171b:pmrd
          Length = 99

 Score = 56.0 bits (28), Expect = 9e-09
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 100 tttgattgagccgcgtcaatatctcctt 127
           ||||||||||||||||||||||||||||
Sbjct: 67  tttgattgagccgcgtcaatatctcctt 94




>54459_sbi-miR171h:pmrd
          Length = 81

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 103 gattgagccgcgtcaatatctc 124
           ||||||||||||||||||||||
Sbjct: 60  gattgagccgcgtcaatatctc 81




>48903_osa-miR171i:pmrd
          Length = 120

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 103 gattgagccgcgtcaatatctc 124
           ||||||||||||||||||||||
Sbjct: 89  gattgagccgcgtcaatatctc 110



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 41 aggtattggcgtgcctcaatc 61
          |||||||||||||||||||||
Sbjct: 8  aggtattggcgtgcctcaatc 28




>48566_gma-miR170n:pmrd
          Length = 80

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 89  agccaagtacttttgattgagccgcgtcaatatc 122
           ||||| ||| |||| |||||||||||||||||||
Sbjct: 47  agccatgtaattttaattgagccgcgtcaatatc 80



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 41 aggtattggcgtgcctcaat 60
          ||||||||||||||||||||
Sbjct: 1  aggtattggcgtgcctcaat 20




>46879_aqc-miR171d:pmrd
          Length = 106

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 95  gtacttttgattgagccgcgtcaatatct 123
           |||||||||||||||||| | ||||||||
Sbjct: 77  gtacttttgattgagccgtgccaatatct 105




>54553_sly-miR171c:pmrd
          Length = 121

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 99  ttttgattgagccgcgtcaatatc 122
           |||||||||||||||| |||||||
Sbjct: 75  ttttgattgagccgcgccaatatc 98