miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>50536_osa-miRf11321-akr:pmrd
          Length = 75

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 6  ggctcgagctcgagctcgagc 26
          |||||||||||||||||||||
Sbjct: 55 ggctcgagctcgagctcgagc 75



 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 7  gctcgagctcgagctcgagcc 27
          |||||||||||||||||||||
Sbjct: 75 gctcgagctcgagctcgagcc 55



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 46 cgagctcgagctcgagcca 64
          |||||||||||||||||||
Sbjct: 72 cgagctcgagctcgagcca 54




>50535_osa-miRf11320-akr:pmrd
          Length = 77

 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 7  gctcgagctcgagctcgagcc 27
          |||||||||||||||||||||
Sbjct: 2  gctcgagctcgagctcgagcc 22



 Score = 42.1 bits (21), Expect = 5e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 6  ggctcgagctcgagctcgagc 26
          |||||||||||||||||||||
Sbjct: 22 ggctcgagctcgagctcgagc 2



 Score = 38.2 bits (19), Expect = 7e-04
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 46 cgagctcgagctcgagcca 64
          |||||||||||||||||||
Sbjct: 5  cgagctcgagctcgagcca 23